Gene Mflv_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3053 
SymbolmetH 
ID4974374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3233051 
End bp3236806 
Gene Length3756 bp 
Protein Length1251 aa 
Translation table11 
GC content67% 
IMG OID640457276 
ProductB12-dependent methionine synthase 
Protein accessionYP_001134318 
Protein GI145223640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.453999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAG CGCACGTGAA CGCCGTCGAG TTCGAGCCGA ACATCCGCCC CGACTGCACC 
GAGGAACTCA CGGCCGCCCT GCGCGAGCGG ATCATGGTGA TCGACGGCGC GATGGGCACG
GCGATCCAGC GCGACCGGCC GGACGAAGCG GGTTACCGCG GGGACCGGTT CACCGAGTGG
CCGACCGCGC TGCAGGGCAA CAACGATCTG CTCAACCTCA CACAGCCGCA GATCATCGAG
GCGATCCACC GCGAGTACCT CGACGCGGGC GCCGACATCC TGGAGACCAA CACGTTCAAC
GCGAACGCGA TCTCGCTCTC CGACTACGAC ATGACCGACC TGGCCTATGA GCTGAATTAC
GCCGGCGCGG CGCTGGCACG CAAGGCCGCC GACGAGTACA GCACCGCCGA CAAGCCCCGC
TACGTCGCCG GCGCGATCGG GCCCACCACC CGGACCGCAT CGATCTCCCC GGACGTCAAC
GACCCCGGTG CCCGCAACGT CTCCTACGAC CAGCTGGTCG CCGCCTACCT GGAGGCCGCC
AACGGTCTGG TCGACGGCGG TTCCGACCTG ATCATGATCG AGACGATCTT CGACTCGCTG
AACGCCAAGG CCGCGGTGTT CGCGGTCGAG ACGCTGTTCG AGGAACGGGG ACGCCGCTGG
CCGGTGATCA TTTCGGGCAC CATCACCGAC GCCTCCGGGC GCACGCTGTC CGGCCAGGTC
ACCGAGGCGT TCTGGAACGC CATCCGGCAC GCCAAGCCGC TCGCGGTGGG GCTGAACTGC
GCGCTGGGCG CTCCGGAGAT GAGGCCCTAC ATCGCCGAGG TGGCGCGCAT CGCGGACACC
TTCGTGTCGT GCTACCCGAA CGCGGGCCTG CCCAACGCCT TCGGTGAATA CGACGAATCG
CCGGAGCGGC AGGCCTCCTA CATCGCCGAG TTCGCCGAGG CCGGGTTGGT CAACCTGGTC
GGCGGGTGCT GCGGCACCGC GCCGCCGCAC ATCGCAGAAA TCGCCAAGGT GGTCGACGGC
AAGACGCCGC GCGAGCTTCC CCAGATCCCG GTGGCCACCC GGCTCTCGGG CCTGGAGCCG
CTGAACATCA ACGACGAGTC GCTGTTCGTC AACATCGGTG AGCGCACCAA CATCACCGGC
TCCGCCCGGT TCAGGAACCT GATCAAGGCC GAGGACTACG ACACCGCGCT GTCGGTGGCC
CTGCAGCAGG TCGAGGTCGG CGCGCAGGTC ATCGACATCA ACATGGACGA GGGCATGATC
GACGGCGTCG CCGCGATGGA CCGGTTCACC AAGCTGATCG CCAGCGAACC CGACATCAGC
CGCGTCCCGG TGATGATCGA CTCCTCCAAA TGGGAGGTCA TCGAAGCGGG CCTGAAGAAC
GTGCAGGGCA AGCCGATCGT CAACTCGATC TCCATGAAGG AGGGCGAGGA GAAGTTCATC
CGCGAAGCGC AACTGTGCCG CAAGTACGGC GCCGCGGTCG TCGTGATGGC CTTCGACGAG
CAGGGGCAGG CCGACAACCT GGAGCGCCGC AAGGAGATCT GCGGCCGCGC GTACCGCATC
CTGACCGAGA AGGTCGGTTT CCCGGCCGAG GACATCATCT TCGACCCGAA CTGTTTCGCG
CTCGCGACCG GCATCGAGGA GCACGCCACC TACGGGATCG ACTTCATCGA GGCCTGCGCC
TGGATCAAGG AGAACCTGCC CGGAGTCCAC ATCTCCGGCG GTATCTCGAA CGTGTCGTTC
TCGTTCCGCG GCAACAACCC GGTCCGCGAA GCCATCCACG CGGTGTTTCT GTTCCACGCC
ATCAAGGCCG GTCTGGACAT GGGCATCGTG AACGCCGGAG CGCTGGTGCC GTACGACTCG
ATCGACCCCG AGCTTCGGGA CCGCATCGAG GACGTCGTGC TGAATCGTCG TGCCGACGCC
GCCGAGCGGC TGCTGGAGAT CGCGGAGCGG TTCAACAAGG CCGACAAAGG CGAAGACCCA
CAGGCCGCCG AGTGGCGCTC CCTGCCGGTC CGGGAGCGCA TCACCCACGC TCTGGTGAAG
GGCATCGATG CACACGTCGA CGACGACACC GAGGAACTGC GCGCCGAGAT CGAGGCTGCC
GGTGGTCGTC CGATCGAGGT GATCGAAGGC CCGCTGATGG ACGGTATGAA CGTCGTCGGC
GACCTGTTCG GCTCCGGCAA GATGTTCCTG CCCCAGGTGG TGAAGTCGGC CCGGGTGATG
AAGAAGGCCG TGGCCTACCT GCTGCCTTAC ATCGAAGCGG AGAAAGCCGA CGCCGGTACC
ACTGGCTCCA AGGACACCAA CGGCACCATC GTGATGGCGA CGGTGAAGGG CGACGTCCAC
GACATCGGCA AGAACATCGT CGGAGTTGTC TTGCAGTGCA ACAACTTCGA GGTGATCGAT
CTCGGGGTGA TGGTCCCCGC GCAGAAGATC CTGGACGCGG CCCGCGAGCA CGACGCCGAC
ATCATCGGCC TGTCGGGCCT GATCACGCCG TCGCTGGACG AGATGAGCAA CTTCGCCGTC
GAAATGGAAC GCGCCGGCCT CGAGATCCCG TTGCTGATCG GTGGTGCGAC GACCTCGCGT
GCCCATACGG CCGTGAAGAT CTCGCCGCGC CGCAGCGGGC CGGTGGTCTG GGTCAAGGAC
GCATCCCGCT CGGTGCCGGT GGCCGCTGCA CTGCTCGACG ACAAGCAACG CCCGGCGCTG
CTGGAGGCCA CCGAGAAGGA CTACGCCTCG CTGCGCGAAC GGCACGCCCA GAAGAACGAC
CGACCGATGC TGACGCTGGA GAAGGCGCGC GCGAACCGCA CGCCGATCGA GTGGGACGGC
TACACCCCGC CCGTGCCTGC GCAGGGTGTC GGCGTGCGAG AGTTCATCGA CTACGACCTC
GCCGAGCTGC GCGAGTACAT CGACTGGCAG CCCTTCTTCA ACGCCTGGGA GATGAAGGGA
CGCTTCCCCG ACATCCTCAA CAACCCGGCC ACCGGCGAAG CAGCCCGCAA GTTGTACAAC
GACGCCCAGG AGATGCTCGA CACCCTGATC AAGGAGAAGT GGCTGACCGC CAACGGCGTG
ATCGGCTTCT TCTGCGCCAA CGCCGTCGGC GACGACATCG AGGTCTACAC CGACGACACC
CGCACCGAGG TTTTGACCAC GCTGTACAAC CTGCGCCAGC AGGGGGAGCA CCGCGACGGC
ATCCCGAACC GCTCGCAGGG CGACTTCATC GCCCCGAAGG AGACCGGCCT CCGGGATTAC
ATCGGGGCCT TCGCCGTCAC CGCGGGTCTG GGCAGCCAGG CCAAGATCAT GGAGTTCAAG
GCGGCCCTGG ACGACTACAG CGCGATCCTG CTGGAGTCGC TCGCCGACCG GCTCGCCGAG
GCGTTCGCCG AGCGGATGCA CGAACGGGTC CGCACGGAGT TCTGGGGCTA TCAGCCCGAC
GAGCAGCTGG ACAACAACGC GCTGATCGCG GAGCGCTACG TCGGGATCCG GCCTGCACCC
GGCTATCCAT CCTGCCCGGA GCACACCGAG AAAGCGACGT TGTTCGGCCT GCTGGACGCC
ACCGAACGGA CCGGCATCGA GCTGACGGAG TCGATGGCGA TGTGGCCGGG CGCGGCGGTC
AGCGGCTGGT ACTTCTCGCA TCCGCAGTCG CAGTACTTCG TGGTGGGCCG GCTGGCGCAG
GATCAGGTCG CCGACTACGC GCGGCGCAAG GGATGGACGT TGCAGGAGGC CGAGCGCTGG
CTGGCCCCGA ACCTGGGCTA CAACCCCGAG GACTGA
 
Protein sequence
MEGAHVNAVE FEPNIRPDCT EELTAALRER IMVIDGAMGT AIQRDRPDEA GYRGDRFTEW 
PTALQGNNDL LNLTQPQIIE AIHREYLDAG ADILETNTFN ANAISLSDYD MTDLAYELNY
AGAALARKAA DEYSTADKPR YVAGAIGPTT RTASISPDVN DPGARNVSYD QLVAAYLEAA
NGLVDGGSDL IMIETIFDSL NAKAAVFAVE TLFEERGRRW PVIISGTITD ASGRTLSGQV
TEAFWNAIRH AKPLAVGLNC ALGAPEMRPY IAEVARIADT FVSCYPNAGL PNAFGEYDES
PERQASYIAE FAEAGLVNLV GGCCGTAPPH IAEIAKVVDG KTPRELPQIP VATRLSGLEP
LNINDESLFV NIGERTNITG SARFRNLIKA EDYDTALSVA LQQVEVGAQV IDINMDEGMI
DGVAAMDRFT KLIASEPDIS RVPVMIDSSK WEVIEAGLKN VQGKPIVNSI SMKEGEEKFI
REAQLCRKYG AAVVVMAFDE QGQADNLERR KEICGRAYRI LTEKVGFPAE DIIFDPNCFA
LATGIEEHAT YGIDFIEACA WIKENLPGVH ISGGISNVSF SFRGNNPVRE AIHAVFLFHA
IKAGLDMGIV NAGALVPYDS IDPELRDRIE DVVLNRRADA AERLLEIAER FNKADKGEDP
QAAEWRSLPV RERITHALVK GIDAHVDDDT EELRAEIEAA GGRPIEVIEG PLMDGMNVVG
DLFGSGKMFL PQVVKSARVM KKAVAYLLPY IEAEKADAGT TGSKDTNGTI VMATVKGDVH
DIGKNIVGVV LQCNNFEVID LGVMVPAQKI LDAAREHDAD IIGLSGLITP SLDEMSNFAV
EMERAGLEIP LLIGGATTSR AHTAVKISPR RSGPVVWVKD ASRSVPVAAA LLDDKQRPAL
LEATEKDYAS LRERHAQKND RPMLTLEKAR ANRTPIEWDG YTPPVPAQGV GVREFIDYDL
AELREYIDWQ PFFNAWEMKG RFPDILNNPA TGEAARKLYN DAQEMLDTLI KEKWLTANGV
IGFFCANAVG DDIEVYTDDT RTEVLTTLYN LRQQGEHRDG IPNRSQGDFI APKETGLRDY
IGAFAVTAGL GSQAKIMEFK AALDDYSAIL LESLADRLAE AFAERMHERV RTEFWGYQPD
EQLDNNALIA ERYVGIRPAP GYPSCPEHTE KATLFGLLDA TERTGIELTE SMAMWPGAAV
SGWYFSHPQS QYFVVGRLAQ DQVADYARRK GWTLQEAERW LAPNLGYNPE D