| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2983 |
|---|
| Symbol | murE |
|---|
| ID | 4974304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 3153734 |
|---|
| End bp | 3155272 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640457205 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_001134248 |
|---|
| Protein GI | 145223570 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.415653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0605514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGC GTCCCAGCCA TCCTGTCGGT ATGCCCCTCG GGGCATTGGC CGATCTGGTC
TGCGCGGAAC CGGCCGACGC CGGTCCTGTG CCCGACCTGC AGGTCACCGG CGTGACCCTG
CGGGGTCAGC ACGCGCAGGC CGGTGACCTG TTCGCCGCGT TGCCGGGTTC GAAGGCCCAC
GGGGCGCGGT ACGCCGCCGA CGCGGTCGAA CGCGGCGCGG TCGCGGTCCT GACCGACGCC
GACGGCGTGT CCGAGATCGC CGCCCACGGC GGCCCGGCCG TTCCGATCCT GGTTCACCCG
GCCCCGCGCT CGGTGCTGGG CGAGGTCGCC GCCGCGGTGT TCGGCAGGCC GTCGGAGCAC
CTGCGGGTGA TCGGCGTGAC GGGCACCTCG GGCAAGACCA CCACGACCTA CCTCGTCGAA
GCGGGCCTGC GCTCCGCCGG CCGGGTCGCG GGGCTGATCG GCACGGTGGG TGTGCGGATC
GACGGTCGGG CGCAGCCGGG CGGGCTCACC ACACCGGAGG CGCCCGATCT GCAGGCGCTG
CTGGCGGCGA TGCTGGAGCA GGGGGTCGAC ACCGTCGTCA TGGAGGTGTC CAGCCATGCG
CTGACCCTGG GCCGTGTCGA CGGGGTGTCG TTCGCCGTCG GCGGGTTCAC GAATCTGTCG
CGGGATCATC TGGACTTCCA CCCCACGATG CAGGACTACT TCGAGGCCAA GGCCCGTCTC
GTCGACCCGA CCTCGCCGAC CCACGCGGCG CGATCGGTGA TCTGCGTCGA CGACGAGTGG
GGTCGGGCGA TGGCCGCGCG GGCGGACGCA CCCGTGACCG TCAGCGTGAC GGGCGACGCC
GACTGGTGGG TCCAGGAGGT CCGTGCGCTC GACGGCGGTG TGCAGGACTT CCTCGCCGTC
GATCCCGCCG GGGTGCACCA CGCGCTGGAG ATCGGCCTGC CCGGTGGCTA CAACGTGGCC
AACTGCCTCC TCGCGGTCGC GCTGCTCGAC GCCGTCGACG TGTCGCCGGA GCAGGCCGCG
CCGGGGTTGC GCGACGCGAC CGTGCCGGGG CGCCTGGAGG CGGTCGACCG CGGGCAGCCG
TTCCTCGCGC TCGTCGACTA CGCGCACAAG CCGGGGGCGC TCGCCGCGGT CCTGCAGACG
CTGCGTGAGC AGTGCGCCGG CCGGCTGGCG GTGGTGTTCG GGGCTGGCGG CGACCGTGAC
CAGGGCAAAC GTGAACCGAT GGGCAGGGTG GCCGCCGAGC TGGCCGATCT GGTCGTGGTT
ACCGACGACA ATCCCCGCGG AGAGGATCCC GCCGTGATCC GCGCGGCGAT CCTGCGGGGC
GCATCCGGTG CGCAGACGGT CGAGATCGGC GACCGGCGCG CCGCGATCGT CCACGCGGTG
CAGTGGGCAC GGGAGGGCGA CATCGTGTTG ATCGCGGGCA AGGGCCACGA GGCGGGGCAG
ACCAGTCAGG GCCGGACGCG GCCGTTCGAC GACCGCGACG AGCTCGCGGC AGCGCTGGAG
ACGCTCCAGA CATCGGGGAC ATCGGGGGCG TCGCAGTGA
|
|---|
| Protein sequence | MNLRPSHPVG MPLGALADLV CAEPADAGPV PDLQVTGVTL RGQHAQAGDL FAALPGSKAH
GARYAADAVE RGAVAVLTDA DGVSEIAAHG GPAVPILVHP APRSVLGEVA AAVFGRPSEH
LRVIGVTGTS GKTTTTYLVE AGLRSAGRVA GLIGTVGVRI DGRAQPGGLT TPEAPDLQAL
LAAMLEQGVD TVVMEVSSHA LTLGRVDGVS FAVGGFTNLS RDHLDFHPTM QDYFEAKARL
VDPTSPTHAA RSVICVDDEW GRAMAARADA PVTVSVTGDA DWWVQEVRAL DGGVQDFLAV
DPAGVHHALE IGLPGGYNVA NCLLAVALLD AVDVSPEQAA PGLRDATVPG RLEAVDRGQP
FLALVDYAHK PGALAAVLQT LREQCAGRLA VVFGAGGDRD QGKREPMGRV AAELADLVVV
TDDNPRGEDP AVIRAAILRG ASGAQTVEIG DRRAAIVHAV QWAREGDIVL IAGKGHEAGQ
TSQGRTRPFD DRDELAAALE TLQTSGTSGA SQ
|
|---|
| |