Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_2913 |
Symbol | |
ID | 4974234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 3082769 |
End bp | 3085972 |
Gene Length | 3204 bp |
Protein Length | 1067 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640457135 |
Product | YVTN beta-propeller repeat-containing protein |
Protein accession | YP_001134178 |
Protein GI | 145223500 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01965] VCBS repeat [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.511883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.352036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGCATT CTGCGTGCAT CGGTCGTATC GGCGCTCTGG CGTTTGCCCT GGGGGTGGGG ATCGGCCTGG GCGCCACGCC CGCCGTCGCG CTCGCAGACG AGACAGCATC CAGTTCCGCC TCGTCCGAGG GCGGGCCGTC GAAACCCCAA CGCCCGGCAA GTGAATCGTC CGGTGCCGAA TCCGATAGCT CCGACACCGA CACAGGCGCG TCCCACGACA CCAACGTCGA CACGGACGCC GACGCCGAGG ACCGAGCAGC CGATGCCGAT GCCGATGCCG ATGTCACCGA GGTAGACCCC GAGGACTCCA CGCGCGCCAC CCCGATCAGT GTCCAGGACG AAGCCACCGA AGTCGACGTG GCCGAGGAGC CGGAACCGGC CGACAGCGCT CCGGCCCTTG GTGTCCCGAC CGAAGCACCC TCCCCCGCAC CGGAACCCAC GAATCCTCAG GCTGAGGCGA CCGTCGACAT CCCGGCCCCG CCCTCCGAAG AGCAGACCCC GGCACCGATG CCGGCGCCCA CGGCGGTGAC CCTGTCGAGC ATCCTGTCCT CTCTGCTCAC GCCCACCGAC ACCCCGAACA CCCCTGCCGA GTCACCATTG TGGCTCGTCG CGGCGGCTGC CCTGCGTCGC CAGATCGATC CCGCCACCAC TTATCAGGCC ACCGCCAACT CCACTTCACT GACCGCCGAG CAGGCCGACG CCATCCGCCG ACTCGGCGAG ATCCTGCTCG ACGGTCCCCC GACCGCCATG GTCGCCACCG ACACCCGCGC CTACCTCGCC CACGCCGGCA GCAAGTCGAT CACGGTGATC GACACTCTCA AAGGCGCTGT GCTGCAGACT ATTTCGCTGC GCTACACCCC GACCAACCTG GCCGTGACAC CCAGCGGCAA CCGGCTCTAC ATCTCCAACG GCATCGCCGG AACGGTCTCG GTGCTCAACA CCGCCACCGA GTCCGTCATC AAAACGATCC GCGTGGGCAG GACCCCGACC GCGCTCGCGG TCAACGCCAA CGGCAGCCGC GTGTACGTCG TCAACAGCGA CGACGGCACG GTCTCCAAGA TCAGCATGCT GACCAACACC GTGGTCGGCA AGGTCTACGG TGTGGCCGAG GGGGTTTCGG AGATCACCAT CAGCCCCGAC GGTTCGACGA TCTACACCCT CAGCAGCACC ACCGGCCAGG TCTCGCGCTT CTCGTCCACC GCGCTGCGCG CCCAGCAGAC GGTGGCCGTG ACACCCGCAT CGCAGGGCAT CACCTTCAGC GCCGACGGGT CCCGGGTGTT CGTCGCCGAT ATCGCCGGCA GCATCCGTGT CCTCGACGCC GCGACGGGCC AGCAGGTCGA CAGCATCGCC GTCACCGCCG GCGTGCCGTT CGACATCGCC GCAAGTCCCG ACGGGACGAC GCTGTACGTG GCACGCAGCG AGGACGGCAA GCTGTCGGCC TACGACATCG CCACCAAGAC CGAACTCACC TCGGTCATCG CCAACCCCTA CGAGGTCGAC GGTCCCCCTC TGATCAGCGT GAGCCCCGAC GGCACCCAGC TGTACTGGGC CGAGTTCGGC GGCACCCGGG TCAACGTCAT CGCCCTCGTC CCCGACAACG CCGATCCCGT CGCACAGGCA CCGGTTGTTA ACGCCCCCAA CACCTCCGGT GAGGTCACCG GTTCGGTGAC CGTCACCGAC CCCGAGGGCA GGCCGCTGAC GTACGAGGTG ATCACAACGG ACAAGGGCTC CGTCACCGTG ACGCGCGGTG CCGACGGGGC GTTCGCCTTC ACGTACAAGG CCACGTCGGC TGCCCGCCAC GAAGCGGCCG CCGACGACGC CGCTCCCGAA ACCAAGCAGG ACACCTTCGT CCTCACCTTC ACCGACGGGC AGCGCGGCGT GGTGTCGGTG CCGATCACCG TCACCATCCC GCCCGCGAAC GCCGCGCCCA CCGCCACCGT GCGCTCCAGC GTGTCCTGGC TGAGTGCGAA GGTTCTCGGC ACGATCACCG CCAGGGACGC AGACAGGGAC ACGCTGACCT ACCTCGCGTC TCCGACGGCC AAGGGCGGAA CCGTCACGAT CGGGAACGAC GGCAGATTCA CCTACACCCC GACCGCGGCC GCACGGCACG CCGCCGCCAA CGCGAACGCC ACCGAAGCCG ACAAGCAGGA CACCTTCGAC GTCGTCATCA ACGACGGGCA CGGCGGACTG ACCACCCTCA CGGTGACCGT CACGGTCAAG CCGGGCAACG ACGCTCCCGA CGCGCGGGTG CGCACCACCG CGTCGTGGTT CGGCCCCGAG GTGTACGGCA CGGTCGTCGC CAGAGACCAG GACCGCGACG GTCTGACGTT CACCGCTTCG GATACCGCCA AAGGTGGTGT CATCGTGATG GATTCGCGGG GCCGGTTCAC CTATACCCCC GCCGAGGCTG CCCGGCACGC CGCGGCCGCC GCCGAGGCGA CCGCAGCCGA CAAACAGGAC ACCTTCGACA TCACCGTCGA CGACGGGCAC GGCGGGGTCA CCACCGTCGC CGTCACCGTC AGGATCAAGC CCGTCAACGC GGCGCCGAGG GGCGCGTCGG CGGCAGAGTT GTTCGCCAAC CCCAACAGCG GCCTGACCAC CGGGAAGATC ACCGCCGTCG ACGCCGACGG CGACTCGCTC ACATACCGGG TATCCCCCTC CACCGGAAGG GGAATCGTCG ACGTCGCCAC CGACGGCACG TTCACCTACC GGCCCACCGA AGCGGCCCGC GAGGCCGCGT CCCGCCCGTT CGCCCCGTCC TGGGTCAGGA CGGACCGGTT CCGGGTGACC GTCGACGACG GCCACGGCGG CACCACCACG CTGACCGTGC GAGTTCCCAT CGCGCCGACC GGGTACGTCA ACCAGGCCCC GACCGACGGG AAATACACTG CAGGGCAGCC TAATCCGAGT AGTGGCAAGG TCAGCGGCAC CGTCACCGCG GCTGATCCCG AACGCGACGA CATCTACTAC CTCGGCTCCG GGCAGACCGC CAAGGGCGGA ACGGTCGTGG TCGAGCGGGA CGGGCGGTTC GTCTACACGC CGACGGATGC GGCACGGCAG CAGGCTGCGT CACCGGACGC GAGCGATGAA GACCGGCAGG ATTCGTTCGT CGTGACCGCG ATCGACCAGT ACGCCGCGAC TCTCGCTGTC CCGGTGACCG TGTCGATCCT GCCGTGGGCG GCGTCGATCG CGGGCCTGGT CTAG
|
Protein sequence | MRHSACIGRI GALAFALGVG IGLGATPAVA LADETASSSA SSEGGPSKPQ RPASESSGAE SDSSDTDTGA SHDTNVDTDA DAEDRAADAD ADADVTEVDP EDSTRATPIS VQDEATEVDV AEEPEPADSA PALGVPTEAP SPAPEPTNPQ AEATVDIPAP PSEEQTPAPM PAPTAVTLSS ILSSLLTPTD TPNTPAESPL WLVAAAALRR QIDPATTYQA TANSTSLTAE QADAIRRLGE ILLDGPPTAM VATDTRAYLA HAGSKSITVI DTLKGAVLQT ISLRYTPTNL AVTPSGNRLY ISNGIAGTVS VLNTATESVI KTIRVGRTPT ALAVNANGSR VYVVNSDDGT VSKISMLTNT VVGKVYGVAE GVSEITISPD GSTIYTLSST TGQVSRFSST ALRAQQTVAV TPASQGITFS ADGSRVFVAD IAGSIRVLDA ATGQQVDSIA VTAGVPFDIA ASPDGTTLYV ARSEDGKLSA YDIATKTELT SVIANPYEVD GPPLISVSPD GTQLYWAEFG GTRVNVIALV PDNADPVAQA PVVNAPNTSG EVTGSVTVTD PEGRPLTYEV ITTDKGSVTV TRGADGAFAF TYKATSAARH EAAADDAAPE TKQDTFVLTF TDGQRGVVSV PITVTIPPAN AAPTATVRSS VSWLSAKVLG TITARDADRD TLTYLASPTA KGGTVTIGND GRFTYTPTAA ARHAAANANA TEADKQDTFD VVINDGHGGL TTLTVTVTVK PGNDAPDARV RTTASWFGPE VYGTVVARDQ DRDGLTFTAS DTAKGGVIVM DSRGRFTYTP AEAARHAAAA AEATAADKQD TFDITVDDGH GGVTTVAVTV RIKPVNAAPR GASAAELFAN PNSGLTTGKI TAVDADGDSL TYRVSPSTGR GIVDVATDGT FTYRPTEAAR EAASRPFAPS WVRTDRFRVT VDDGHGGTTT LTVRVPIAPT GYVNQAPTDG KYTAGQPNPS SGKVSGTVTA ADPERDDIYY LGSGQTAKGG TVVVERDGRF VYTPTDAARQ QAASPDASDE DRQDSFVVTA IDQYAATLAV PVTVSILPWA ASIAGLV
|
| |