| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2900 |
|---|
| Symbol | |
|---|
| ID | 4974222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 3066495 |
|---|
| End bp | 3068024 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640457122 |
|---|
| Product | CHAD domain-containing protein |
|---|
| Protein accession | YP_001134165 |
|---|
| Protein GI | 145223487 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5607] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.6944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA AATCCCCCGA AACCTCCAGG TATACGGAAA CCGAGCGCAA GTTCGAGGTC
GTCGACTCGA CCGTCTCGCC GTCCTTCGAG GGGCTGTCGG CGGTCGCTCG CGTCGAGCGG
TCACCGTCAC AGTCACTGGC CGCTGTGTAC TTCGACACCC CGGGCCGCGA CCTCGCCCGC
CACAAGATCA CGCTGCGGCG GCGCACCGGC GGCACGGACG CGGCCTGGCA TCTGAAGCTG
CCCGCCGGCG CCGAGACCCG CACCGAGATC CACGTGCCGC TCGGCGACGA TGAGCCGGCA
GACGACCCGA CGGTGCCCGA GAGCCTGCGG GATGTGGTGG CCGCGATCGT CCGGGACCGC
CCGCTGGCAC CGGTCGCCCG GATCAACACG ACCAGGGTCG TCGAGAAGCT CTACGGCCCG
GGCGGGGTGG GCATCGCGGA GTTCTGCGAC GACCACGTGA CCGCCGGCGC GGTGGGCGGT
GACGAGCTGA CGTGGCGCGA ATGGGAGCTG GAGTTGCAGC CCGGCGGCGA CACCGACGTC
TTCGACAGGT TGACCAACCG CCTGCTCGAC GCCGGCGCCC GGGCTGCAGG ACATGGGTCG
AAGCTGGCTC GGGTGCTGGC CAGCGCACCG GACGCCGGTG ACAGCGTCCC CGGGGAGTCG
ACCGGCGCGG AAGCCGACGA TCCCGCCCGC CGCGCCGTCG CCCAGCACAT CGCGGAGCTC
GTCGAGTGGG ACCGCGCGGT GCGCGCCGAC GAATGGGATT CGGTGCACCA GATGCGGGTG
ACCACGCGCA AGATCCGCAG CCTTCTCCAG TCCTCGGAGG GGTCGTTCGA CATCGCCGAC
CACGAGTGGA TCCTCGACGA GTTGCGCGAG CTCGCCGCCG TGCTCGGTAT AGCGCGCGAC
GCCGAGGTAC TCGCCGAACG CTACGAACGT GCGCTCGACG CGCTGCCCGA GGTCAATGTC
CGCGGACCCG TGCGGGAACG CCTCGTCGAG GGTGCCAAGA AGCGGTATCA GACGGGGTGG
AAGCGGTCGT TGACCGCGAT GCGCTCGCAG CGCTACTTTC GGTTGCTCGA CGCGCTCGAC
GAACTCGTCG CCTCCGATCC CCCGGAATCG GCCGCCGGCG AAGAGCCACC ACAGCTGAAC
ATCGGCTCCG CGTACAAGCG GGTTCGCAAG GCCGCCAAAG CAGCCCGCGC CGCAGCGGGG
GACGCCGAGA CGGGCACCGA CGAGTCGAAC GAGGCGCTAC ATCGGATTCG TAAGCGCGCG
AAGGCTCTTC GATACACCGC GGCGGCCACC GCAGCGTCGA AGGTCGCCGA CCGGGCCAAG
GCGATCCAGT CTTTGCTCGG AGACCACCAG GACAGCGTGG TCAGCCGCAC GCACCTGAGC
CGACAGGCCG AGGTCGCGCA CGCCGCGGGC GAGGACACCT TCACCTACGG ACTGCTGTAC
CAACTCGAAG ACGACCTCGC CCGGCGCTGC GAGGAGCAGA TCGACGACGC CCTGAAGGCG
CTCGACAAGG CGGTCGCCAA GTCCCGGTGA
|
|---|
| Protein sequence | MAAKSPETSR YTETERKFEV VDSTVSPSFE GLSAVARVER SPSQSLAAVY FDTPGRDLAR
HKITLRRRTG GTDAAWHLKL PAGAETRTEI HVPLGDDEPA DDPTVPESLR DVVAAIVRDR
PLAPVARINT TRVVEKLYGP GGVGIAEFCD DHVTAGAVGG DELTWREWEL ELQPGGDTDV
FDRLTNRLLD AGARAAGHGS KLARVLASAP DAGDSVPGES TGAEADDPAR RAVAQHIAEL
VEWDRAVRAD EWDSVHQMRV TTRKIRSLLQ SSEGSFDIAD HEWILDELRE LAAVLGIARD
AEVLAERYER ALDALPEVNV RGPVRERLVE GAKKRYQTGW KRSLTAMRSQ RYFRLLDALD
ELVASDPPES AAGEEPPQLN IGSAYKRVRK AAKAARAAAG DAETGTDESN EALHRIRKRA
KALRYTAAAT AASKVADRAK AIQSLLGDHQ DSVVSRTHLS RQAEVAHAAG EDTFTYGLLY
QLEDDLARRC EEQIDDALKA LDKAVAKSR
|
|---|
| |