| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2889 |
|---|
| Symbol | |
|---|
| ID | 4974210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 3056554 |
|---|
| End bp | 3057240 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640457110 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001134154 |
|---|
| Protein GI | 145223476 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.119829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGACA TGCTGGACGG CACCCGCAGG GTCGCGCCCG TGGGACGCGG CGATCTGGTG
CTCTTCGATC TCGACGGCAC CCTGACCGAT TCGGCCGAGG GCATCGTGGC GAGTTTCCGG
CACGCCCTGC AGAGCGTCGG CGCCGCGGTG CCCGACGGGG ACCTGGTGAG CAAGATCGTC
GGGCCGCCCA TGCCGTTGAC GTTCCAGCGG ATGGGACTCG GTGACCTCGT GGACGACGCG
ATCGCCGCCT ACCGCGCCGA CTACACCACC CGCGGCTGGT CGATGAACCG GCCCTTCGAC
GGCATTCCGG CGCTGCTGGC CGACCTGCAG GCCGCCGGGG TCCGGATGGC CGTGGCGACC
TCGAAGGCCG AGACCACCGC GCAGCGGATC CTGGCGCACT TCGGCCTCGA CGGCCACTTC
GAGGTCATCG CCGGCGCCAG CAACGACGGC ACGCGCGCGG CCAAGTCCGA CGTGGTCGCC
CATGCGCTGG CCCAGCTGGC ACCCGTGCCG GACAACGTGG TGATGATCGG CGACCGGTCG
CACGACGTCG AGGGTGCCGC GGTGCACGGA ATCGCCACGA TTGTCGTGGG CTGGGGCTAC
GGCCGCACCG ACTTCGCCGG CCGCGAGAGC GGTGCGCTGG CCCACGTGAC CGATGTCGAC
GATCTGCGCG AGGTGCTCGG TGTCTGA
|
|---|
| Protein sequence | MTDMLDGTRR VAPVGRGDLV LFDLDGTLTD SAEGIVASFR HALQSVGAAV PDGDLVSKIV
GPPMPLTFQR MGLGDLVDDA IAAYRADYTT RGWSMNRPFD GIPALLADLQ AAGVRMAVAT
SKAETTAQRI LAHFGLDGHF EVIAGASNDG TRAAKSDVVA HALAQLAPVP DNVVMIGDRS
HDVEGAAVHG IATIVVGWGY GRTDFAGRES GALAHVTDVD DLREVLGV
|
|---|
| |