| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2801 |
|---|
| Symbol | |
|---|
| ID | 4974122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2957768 |
|---|
| End bp | 2959312 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640457022 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001134066 |
|---|
| Protein GI | 145223388 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGTC CCCCGCCAGT TCCCGACAAC TATCCATCAT CTCGATCGCT GCCCGGGGTT
GGAGCGCGCA CCGCCGCGGT CCTTGTGTTC ACCTCTTCGG CGGCGGTGCT GGTGGTGGAG
ATCACCGCGC TGCGGTTGCT GGCGCCGTAC CTCGGGCTGA CTTTGGAAAC AAGCACCCTG
GTCATCGGAA TCGCCCTGGC CGCAATTGCC CTTGGTTCCT GGGCGGGCGG CCGCCTTGCC
GACCGCGATG ATCCGCGTCG CTGGTTGGGG TTATCGCTGG GGATATCGGG CGTGGTCGTG
GCGTTCACGC CTTCCGCAGT CCGCACGGCG GCCGAGTGGG CGCCGGCGAC GCTGTTGATA
GTTGCGGCGC TCACTATTTT GGCACCCGGA GCGTTGCTGT CGGCGGTGAC ACCGATGGTG
ACCAAGATGC GCCTGATCAC GCTCGCCCAG ACGGGCACCG TTGTCGGTCA GCTGTCTGGC
GTAGGCACCG TCGGTGCCAT CGCCGGCACT GTGCTTACCG GATTTGTCTT CGTGTCGCGG
GTGCCAGTCA GCATGATACT TATCGGCCTT GGATCGATGT TGGTGCTCGG CGGCATCGTT
GTGGAGTGGC GCATGCGCCG GCGGAACACT GTCAGCGCCG CCGTACTTAC GCTCCTAACC
GTTGGCGCGG GTCTGGCTGG CTACGTTGCA CCCGGCGGTT GCGACGTGGA AACCAAGTAC
CATTGCGCCC GCGTCATCGC CGACCCGGAG CGAGACAGCG GCCGCACCCT CATGCTCGAT
GGCGCGCGCC ACTCGTACAT AGACCTCCAA GATCCGGCCG TCCTGCAGTT CATTTACGTG
CGCGCCTTTG CTTCGGTCGT CGACGCATCC TTCCCGACCG AAAAGACACT GGAGGCCTAC
CACCTTGGTG GGGGTGGCCT TACCTTCCCG CGATACCTCG CTGCTACTCG GCCAGGAACC
CATAACGTGG TGTCCGAAAT CGACGGCGGC GTGGTGCGCA TAGACCGAGA CCGACTCGGA
TCAGATTCCG AGGCCGGGCT TGAGGTGCGC GTCGAGGACG GCAGACTGGG CCTTGCGCGG
CTCGATGACG ACAGCCGTGA TCTGATCGTC GGCGACGCCT TTGGCGGCGT GAGCGTGCCT
TGGCACCTGA CGACTGTGGA AGCGCTGACA GACATACGTC GGGTCCTCAA AGAGGACGGT
GTGTACATTG CGAATCTCAT CGATTACGGA GAGCTGGCGT TTGCACGTGC CGAAGTCGCA
ACACTCACAC AGGTTTTCAA GTACGTCATA GTCACCGCCG AGGCCGGCGA CGTCGGCGTC
GATTCCGCGA CGACACCCGA TGGCGGCAAC CTGGTCGTGC TCGCCTCCGA TCGACCGGTT
GACCGTGACG CCCTTCAGAG GGTTCTGCAT ACTCGCAACA CCGGGTGGAC GACCGCTACC
GGCAACGACC TCAGATTGTG GATCCGCGAC GCCCAAGTGC TGACCGACGA CTACGCACCC
GTTGATCAAC TTCTCGATCC TTACCGTCAA CAGAGCGGGG AGTAA
|
|---|
| Protein sequence | MTGPPPVPDN YPSSRSLPGV GARTAAVLVF TSSAAVLVVE ITALRLLAPY LGLTLETSTL
VIGIALAAIA LGSWAGGRLA DRDDPRRWLG LSLGISGVVV AFTPSAVRTA AEWAPATLLI
VAALTILAPG ALLSAVTPMV TKMRLITLAQ TGTVVGQLSG VGTVGAIAGT VLTGFVFVSR
VPVSMILIGL GSMLVLGGIV VEWRMRRRNT VSAAVLTLLT VGAGLAGYVA PGGCDVETKY
HCARVIADPE RDSGRTLMLD GARHSYIDLQ DPAVLQFIYV RAFASVVDAS FPTEKTLEAY
HLGGGGLTFP RYLAATRPGT HNVVSEIDGG VVRIDRDRLG SDSEAGLEVR VEDGRLGLAR
LDDDSRDLIV GDAFGGVSVP WHLTTVEALT DIRRVLKEDG VYIANLIDYG ELAFARAEVA
TLTQVFKYVI VTAEAGDVGV DSATTPDGGN LVVLASDRPV DRDALQRVLH TRNTGWTTAT
GNDLRLWIRD AQVLTDDYAP VDQLLDPYRQ QSGE
|
|---|
| |