Gene Mflv_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2529 
Symbol 
ID4973850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2629384 
End bp2630097 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID640456742 
Product4-diphosphocytidyl-2C-methyl-D-erythritol synthase 
Protein accessionYP_001133794 
Protein GI145223116 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.920696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.398037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGG TCGGGGTGGT GCTCGCCGCG GGCCTGGGGA CACGTGTCGG CGCCGACGGC 
AACAAGGCCT ACCTGCCGCT GGCCGGGCGC AGCATGCTGG CCTGGTCGCT GGACACGCTG
ACCCGCCTGC CCGACGTGGC GCGCACCATC CTGGTGTTCC GACGCGGGGA ATTCGCCCTC
GCGCACGACA CGGTGAGACA CGAACTCGGC GACAGGCCAA TCGAATTCGT CGAAGGCGGG
GAAACCCGGC ACGGCTCGGA AACGAACATG CTGCGCCATC TGGCCGACGA CATCGACGCC
GGCACCGTCG ACGTGGTGGC GATCCACGAC GCTGCCCGAC CGTTGGCCGG ACCCGAGATG
TTCGGCCGGG CGATCGCACT GGCCCGCCAA TACGGCGGTG CGTTGCCGGC ACTGCCCACC
CGGGATCTCG CCGAGATGCG CGACGACATC CTGCAGCCGG TGGCCCGCCG CGGTGAGCTG
GTCAGAGTCC AGACCCCGCA GGCGTTCCGC GCCCGGGACC TGCTGCACGC CTACCGATGC
GCCGAACGCG ACGGATTCGA GGGCACCGAC ACGTCGTCGT GCGTCGAGCG GTACACCGAT
GTGCAGGTGC GGATCTTCGA CGGTCGCGCG ACCAACCTGA AGGTCACCTA CGCACGCGAC
GTGGCCGTGG CCCAACACCT TCTCAACCCG CCGGGTCAGA GTCCCGGCTC GTGA
 
Protein sequence
MDAVGVVLAA GLGTRVGADG NKAYLPLAGR SMLAWSLDTL TRLPDVARTI LVFRRGEFAL 
AHDTVRHELG DRPIEFVEGG ETRHGSETNM LRHLADDIDA GTVDVVAIHD AARPLAGPEM
FGRAIALARQ YGGALPALPT RDLAEMRDDI LQPVARRGEL VRVQTPQAFR ARDLLHAYRC
AERDGFEGTD TSSCVERYTD VQVRIFDGRA TNLKVTYARD VAVAQHLLNP PGQSPGS