| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2347 |
|---|
| Symbol | |
|---|
| ID | 4973669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2450265 |
|---|
| End bp | 2452277 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640456560 |
|---|
| Product | helicase c2 |
|---|
| Protein accession | YP_001133613 |
|---|
| Protein GI | 145222935 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.490547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.859108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTCA CCGAGCTTCT GGCCACCGCG GTCGCGGCGT TGGGCGGCGC CACCCGCGAC
GGTCAGATCG AGATGGCCGA AGCGGTGGCC CGGGCGTTCG CCACCGGTGA GCACCTCGCC
GTCCAGGCCG GTACCGGCAC CGGGAAGTCG CTGGCCTACC TGGTGCCCGC GATCGCCCAC
TCACTCGACG ACAACCGGCC CGTGGTGGTG TCCACCGCCA CCATCGCGCT GCAGCGCCAA
CTGGTCGACC GCGACCTGCC CCGCCTGGCC GACTCCCTGT CGGGTGCGCT GCCGAGGCGG
CCGGTGTTCG CGCTGCTGAA AGGGCGCGGA AACTACCTGT GCCTGAACAA GATCCACAAC
GGATCGACCG CATCCGAGCC CGAGGACGTG CCCCAGGAGG AACTGTTCTC GCCGATGGCC
GCGAGCGCAC TCGGCCGCGA CGTGGCGCGG CTGACCGAAT GGTCGGACAC CACCGACACC
GGTGACCGTG ACGATCTCAA ACCCGGTGTG CCGGACCGGT CGTGGGCGCA GGTCAGCGTC
TCGTCGCGGG AGTGCATCGG GGTGTCGCGG TGCCCGTTCG GCACCGACTG CTTCTCCGAG
CGGGCGCGGG GGCGCGCGGC CGAGGCCGAC GTGGTCGTCA CCAACCACGC GCTGCTGGCC
ATCGATGCGA TCGGCGACCT CAACGTGCTC CCCGAGCACG AGATGCTCGT CGTCGACGAG
GCACACGAAC TGGTCGACCG CGTCACCAGC GTGGCCACCG CGGAGCTGTC GCCGACTTCC
CTGGGCGTGG CGCACCGGCG CGCGGCGCGC GTCGTGTCCG CAGAACTCGC GCAGCGACTG
GAGGCGGCGA TAGCGACGTT CACCTCCGCA CTGTTCGACG CCCGCCACGG ACGCATCGAC
GTGCTCGACG ACGAGCTGGC GAGTTATCTG ACGGTGCTGC GCGATTCCGC GCACGCGGCA
CGCACCGCGG TGGACACCGC GCGCAACGAC CCGAAGACGG CGACGGCCCG CTCCGAAGCC
GCCTCCGCGT TGTCCGACGT GGCCGACACG TCCTCGCGGA TTCTCGACTC GTTCGTCCCC
GCGATCCCCG ACCGTACCGA CGTCGTCTGG CTCGAACACA TCGAAGACGG CAGGTCCGCC
GGTCGCACGA TCCTGCGCGT CGCCCCGCTG TCGGTGGCAG GTCTGTTGCG CAGCAGGCTG
TTCGGGCATT CCACGGCGGT GCTGACGTCG GCGACCCTGA CCATCGGCGG CAGCTTCGAC
GCGATGGCCT CGGCGTGGGG TCTTGCCGGG CCACGCGACG ACACCGCGGC CGCGCCCGAT
CCCGGATGGC GCGGGCTGGA TGTGGGATCG CCGTTCGACC ACGCGAAGGC GGGCATCCTC
TACGTCGCGG CGCACCTGCC ACCGCCCGGC CGGGACGGCA CCGGATCGGC CGAGCAACTC
GACGAGATCG CCGCGCTGAT CGAGGCCGCG GACGGACGCA CCCTCGGACT GTTCTCCTCG
ATGCGGGCCG CCAAGGCCAC CGCCGAGGTG ATGCGCGAAC GGCTCGGCAC CCCGGTGCTG
TGCCAGGGCG ACGACACCAC CTCGGCCCTG GTGCAACGGT TCGCCGACGA TGAACAGACC
TCGCTGTTCG GCACCCTGTC ACTGTGGCAG GGCGTCGACG TGCCGGGCCC TTCGCTGTCG
CTGGTGCTGA TCGACCGCAT CCCGTTCCCC CGGCCCGACG ACCCCCTGCT GACCGCCCGC
CAGCGCGCGA TCGCAGCGCG CGGCGGCAAC GGGTTCATGG CGGTGGCGGC CAGTCACGCC
GCGCTGCTGC TGGCCCAGGG GGCCGGCAGA CTGCTGCGCC GCGTCGAGGA CCGCGGCGTC
GTCGCCGTGC TGGACTCCAG GATGGCCACC GCCCGCTACA GCGGATTCCT GCGCGCGTCG
TTGCCGCCGT ACTGGGCGAC GACGGACGGT GCGGCGGTGC GGGCCGCGCT TCGGCGCCTG
TGCGATACCG AGGACAGCCG AGTCGCGCGA TGA
|
|---|
| Protein sequence | MEVTELLATA VAALGGATRD GQIEMAEAVA RAFATGEHLA VQAGTGTGKS LAYLVPAIAH
SLDDNRPVVV STATIALQRQ LVDRDLPRLA DSLSGALPRR PVFALLKGRG NYLCLNKIHN
GSTASEPEDV PQEELFSPMA ASALGRDVAR LTEWSDTTDT GDRDDLKPGV PDRSWAQVSV
SSRECIGVSR CPFGTDCFSE RARGRAAEAD VVVTNHALLA IDAIGDLNVL PEHEMLVVDE
AHELVDRVTS VATAELSPTS LGVAHRRAAR VVSAELAQRL EAAIATFTSA LFDARHGRID
VLDDELASYL TVLRDSAHAA RTAVDTARND PKTATARSEA ASALSDVADT SSRILDSFVP
AIPDRTDVVW LEHIEDGRSA GRTILRVAPL SVAGLLRSRL FGHSTAVLTS ATLTIGGSFD
AMASAWGLAG PRDDTAAAPD PGWRGLDVGS PFDHAKAGIL YVAAHLPPPG RDGTGSAEQL
DEIAALIEAA DGRTLGLFSS MRAAKATAEV MRERLGTPVL CQGDDTTSAL VQRFADDEQT
SLFGTLSLWQ GVDVPGPSLS LVLIDRIPFP RPDDPLLTAR QRAIAARGGN GFMAVAASHA
ALLLAQGAGR LLRRVEDRGV VAVLDSRMAT ARYSGFLRAS LPPYWATTDG AAVRAALRRL
CDTEDSRVAR
|
|---|
| |