| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2171 |
|---|
| Symbol | |
|---|
| ID | 4973493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 2246918 |
|---|
| End bp | 2248057 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640456380 |
|---|
| Product | N-succinyldiaminopimelate aminotransferase |
|---|
| Protein accession | YP_001133437 |
|---|
| Protein GI | 145222759 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.881952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0135925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGACTG AGCCCACGGC TGAGCTCGCC CGCCGGCGGC TGAGAGCCCC GGTCTCCGCG
TCGTTGCCGG TGTTCCCGTG GGACACCCTG GCCGACGTCA CCGCGGCGGC CCGTGCCCAC
GAGAGTGGAA TCGTCGACCT CTCGGTCGGC ACCCCGGTCG ACGAGGTGGC GCCGGTGATC
CGCGACGCGC TCGCGGCGGC CGGTTCCGCC CCCGGCTACC CGACGACCCA CGGCACGACC
GCGTTGCGTG ACGCCGCGGT CGCCGCGCTG CACCGGCGCT ACGGGATCAC CGGCCTGGAC
CCCGCCGCGG TGCTGCCGGT CATCGGTACC AAAGAACTGA TCGCGTGGTT GCCGACGCTT
CTCGGCCTCG GCGCGGCCGA CACCGTCGTG GTCCCCGAAC TGGCCTACCC GACCTATGAG
GTCGGTGCGC TGCTCGCCGG CGCCGCGGTG GTGCGCGCGG ACTCCCTGAC ACAGCTGGGC
CCCGCGGCCC CGCCACTGGT GTACCTGAAC TCACCCAGCA ACCCGACCGG CAAGGTGCTC
GGGGTCGACC ACCTCCGCAA GGTGGTGGGC TGGGCGCGCG ACCGCGGCGT GCTGGTCGCG
TCCGACGAGT GCTATCTGGG TCTGGGCTGG GACGCCACCC CCGTCTCGGT GCTGCACCCC
GACGTGTGCG ACGGCGACCA CACCGGGCTG CTGGCCATCC ACTCGCTGTC GAAGACGTCG
TCGCTGGCCG GGTACCGCGC CGGTTTCGTC GCCGGCGATC CCGCCGTCGT CGCCGAACTG
CTCGCGGTGC GCAAGCACGC CGGGATGATG GTGCCGACGC CGATTCAGGC CGCGATGGTC
GCCGCTCTCG ACGACGACGC GCACGAGCGG ACGCAGCGAG CCCGCTATCA GCGTCGCCGC
GACGCACTGC TGCCCGCGCT GGTGTCCGCA GGGTTCACCG TGGACCACTC CGAGGCGGGC
CTCTACCTGT GGGCCACCCG CGACGAGCCG TGCCGCGACA CCCTCGCATG GCTCGCGCAG
CGCGGCATCC TGGTCGCCCC CGGAGAGTTC TACGGGCCAC GCGGCACCCG GCACGTACGG
GTGGCGCTGA CCGCGACCGA CGAGCGCATC GACGCGGCCG TGGAGCGCCT CGGTTCCTAG
|
|---|
| Protein sequence | MRTEPTAELA RRRLRAPVSA SLPVFPWDTL ADVTAAARAH ESGIVDLSVG TPVDEVAPVI
RDALAAAGSA PGYPTTHGTT ALRDAAVAAL HRRYGITGLD PAAVLPVIGT KELIAWLPTL
LGLGAADTVV VPELAYPTYE VGALLAGAAV VRADSLTQLG PAAPPLVYLN SPSNPTGKVL
GVDHLRKVVG WARDRGVLVA SDECYLGLGW DATPVSVLHP DVCDGDHTGL LAIHSLSKTS
SLAGYRAGFV AGDPAVVAEL LAVRKHAGMM VPTPIQAAMV AALDDDAHER TQRARYQRRR
DALLPALVSA GFTVDHSEAG LYLWATRDEP CRDTLAWLAQ RGILVAPGEF YGPRGTRHVR
VALTATDERI DAAVERLGS
|
|---|
| |