Gene Mflv_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2139 
Symbol 
ID4973461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2214503 
End bp2216134 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content68% 
IMG OID640456348 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_001133405 
Protein GI145222727 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.301041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TGCTGGCGCA ATCCGAGACG GTCGGCAACC CGCTGGCCAA CATCGGCATC 
TTCAGCCTGT TCGTCGTGGT CACGATGATC GTCGTGATCC GGGCGAGCAA GCGCAACGCC
ACCGCCGACG AGTTCTTCAC CGGCGGCCGC GGCTTCTCCG GACCGCAGAA CGGCATCGCG
ATCGCCGGTG ACTACCTGTC GGCGGCCAGC TTCCTCGGCA TCGCCGGCGC GATCGCGGTG
TACGGGTACG ACGGCTTCCT GTACTCGATC GGCTTCCTGG TCGCGTGGCT GGTCGCCCTG
CTGCTGGTGG CCGAATTGCT CCGCAACACA GGACGATTCA CCATGGCCGA CGTGCTGAGC
TTCCGGCTCA AGCAACGCCC GGTCCGGCTG GCCGCGGCCA CCAACACCCT GACGGTGTCG
CTGTTCTACC TGCTGGCCCA GATGGCCGGC GCCGGCGGCC TGGTCGCCCT GCTGCTCGAC
ATCAACAGCC GCGCAGGGCA GTCCGTCGTG ATCGCCGTGG TCGGCGTGCT GATGATCGTC
TACGTCCTGG TCGGCGGCAT GAAGGGCACG ACGTGGGTGC AGATCATCAA GGCCGTGCTG
CTGATCGCCG GTGCCGGCTT CATGACGGTG ATGGTGCTCG CGAAGTTCGG GCTGAACTTC
TCCGAGATCC TCGGCTCCGC CCAGTCGGCC ATCAGCGGTG CGACCACCGC GGGCGTCGCC
GATCGTGACG TGCTGGCCCC CGGCGCGCAG TACGGCGGTT CGCTGACCTC GCAGATCAAC
TTCATCTCCC TGGCGCTGGC GCTGGTGCTG GGCACCGCGG GTCTGCCGCA CGTGCTGATG
CGCTTCTACA CGGTGCCGAC CGCCAAAGAA GCCCGGCGCT CGGTGGTGTG GGCGATCGCG
TTGATCGGCG CCTTCTACCT GTTCACCCTG GTGCTCGGCT ACGGAGCCGC GGCGCTGGTC
GGTCCGGACC GCATCCTCGG CGCGGCCGGC GGTGTCAACT CGGCGGCCCC GTTGCTGGCC
TTCGAGCTCG GCGGCGTGAT CCTGCTCGGC GTCATCTCCG CGGTCGCGTT CGCGACCATC
CTCGCGGTGG TGGCGGGGCT GACGATCACC GCGTCGGCAT CGTTCGCCCA CGACATCTAC
GCGTCGGTGT TGAAGTCGCA CAAGGTGACC GAGGCCGAGC AGGTGAAGGT CTCGCGGATC
ACCGCCGTCG TGCTCGGCAT CCTCGCGATC GGCCTGGGCA TCCTGGCCAA CGGGCAGAAC
ATCGCGTTCC TGGTGGCGCT GGCGTTCGCG GTGGCGGCGG CGGCGAACCT GCCGACGATC
ATCTACTCGC TGTACTGGAA GCGGTTCAAC ACCCGTGGCG CGCTGTGGAG CATGTACGGC
GGTCTGATCT CGACCATCGT GCTGATCGTG TTCTCCCCGG CGGTGTCCGG ATCGAAGACC
GCGATGATCC CGGGCGCGGA CTTCGCGTTC TTCCCGCTGG CCAACCCCGG CATCGTGTCC
ATCCCGCTGG CCTTCATCCT GGGCATCGTC GGCACGCTGA CCTCACCTGA CGACGAGGAC
CCGAAGGTCG CTGCCGAGAT GGAGGTCCGC TCGCTGACCG GCATCGGGGC CGAGAAGGCC
GTGTCCCACT AG
 
Protein sequence
MTTLLAQSET VGNPLANIGI FSLFVVVTMI VVIRASKRNA TADEFFTGGR GFSGPQNGIA 
IAGDYLSAAS FLGIAGAIAV YGYDGFLYSI GFLVAWLVAL LLVAELLRNT GRFTMADVLS
FRLKQRPVRL AAATNTLTVS LFYLLAQMAG AGGLVALLLD INSRAGQSVV IAVVGVLMIV
YVLVGGMKGT TWVQIIKAVL LIAGAGFMTV MVLAKFGLNF SEILGSAQSA ISGATTAGVA
DRDVLAPGAQ YGGSLTSQIN FISLALALVL GTAGLPHVLM RFYTVPTAKE ARRSVVWAIA
LIGAFYLFTL VLGYGAAALV GPDRILGAAG GVNSAAPLLA FELGGVILLG VISAVAFATI
LAVVAGLTIT ASASFAHDIY ASVLKSHKVT EAEQVKVSRI TAVVLGILAI GLGILANGQN
IAFLVALAFA VAAAANLPTI IYSLYWKRFN TRGALWSMYG GLISTIVLIV FSPAVSGSKT
AMIPGADFAF FPLANPGIVS IPLAFILGIV GTLTSPDDED PKVAAEMEVR SLTGIGAEKA
VSH