Gene Mflv_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2103 
Symbol 
ID4973425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2179609 
End bp2180970 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content69% 
IMG OID640456312 
Productvirulence factor Mce family protein 
Protein accessionYP_001133369 
Protein GI145222691 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.265097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.867723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCT TCAGCGAACG CAACCAGCTC GTCATCGGCG CCGTCGGCGT CGGGATCACC 
GCGGCCATCG TGCTCGGTGC CACGAACTAC GACAAGATCC CGCTGTTCGA TCCGGGCCGC
GAGTACACCG CGCACTTCGC CGAGGCCGGC GGGCTGACCA CCGATGCCGC CGTTCAGGTT
TCGGGGTTCA AGGTCGGACA GGTCAAGTCC ATCGAGCTCG ACGGGCCCCA GGTGCTGGTG
ACGTTCACCG TGGACAAGGG CATCCGCCTG GGCGACCGGA CCGAAGCCGC CATCAAGACC
AAGGGCCTGC TGGGCACCAA GATCCTCGAG GTGATCGCCC GGGGTGAGGG CCAGCAGGAC
GGCACCATCC CGATCGACCG GACGACCTCG CCCTACCAGC TTCCGGATGC ACTGGGCGAG
CTGTCGGCGA CGATCAGCGG CCTCGACACC GACCAGCTCT CGGAATCGCT GCGGGTGCTG
TCGGCGACAT TCGCCGACAC CCCGCCGCAG CTCAAGATCG CGGTGGAGGG TGTGGCGCGG
TTCTCGGACA CGCTCAACGC ACGCGACGCG CAGCTGCGCG GTCTGCTCGC CAACGCGAAC
AAGGCCACGA CCGTGCTGGC CGAACGCAGC GAGCAGGTCG TCGGACTGGT CTCGAACACC
AACGCGCTGT TGGCCGAACT GCAGAACCAG AGCGCCGCGG TGGATCAGAT CTCGGGCAAC
ATCTCGGCGC TGAGCGCGCA ACTGCAGGGC TTCATCGGCG AGAACCGCGA CACCATGAAG
CCGGCGCTCG ACAAGCTCAA CGGCGTGCTG ACGATTCTCG ACAACCGCAA GGAGCGGCTG
CAGAAATCGC TGAGCCTGCT CAACGACTAC TCGATGTCGC TGGGTGAGTC GGTGTCGGCC
GGTCCGTTCT TCAAGACCTA CGTCGCCAAC CTGCTGCCCG GGCAGTTCCT GCAGCCGTTC
ATCGATGTCG CGTTCTCCGA TTTGGGGCTC GACCCGAATG TCCTTCTGCC GTCGCAGCGC
AGCGATCCGC AGGTCGGTCA ACCCGGGACG CCGGCGATGC CGGTGCCGTT CCCGCGCACC
GGTCAGGGCG GCGAGCCGCG GATGACGATC CCCGACGCGA TCACCGGTAA CCCGGGTGAC
GCCGGGTGCG GCCCGCCGGG GATTCCGCTG CCAGGCCCCA CCGGCTGCTA CCCGTACCGC
GAACCGCTGC CCGCGCCGCC TCCCGGCGGG CCCCCGCCCG GTCCGCCCGC GGTGTCGCCG
CCGGGGCTGG CGTCGACACC GACGCCGGAC ACGGGGCTGC TGGTTCCGGC GCCCGGTGAG
GCGCCGCCGC TGGTTCCCGT ACCCGGGGAG GGCACGCGAT GA
 
Protein sequence
MKPFSERNQL VIGAVGVGIT AAIVLGATNY DKIPLFDPGR EYTAHFAEAG GLTTDAAVQV 
SGFKVGQVKS IELDGPQVLV TFTVDKGIRL GDRTEAAIKT KGLLGTKILE VIARGEGQQD
GTIPIDRTTS PYQLPDALGE LSATISGLDT DQLSESLRVL SATFADTPPQ LKIAVEGVAR
FSDTLNARDA QLRGLLANAN KATTVLAERS EQVVGLVSNT NALLAELQNQ SAAVDQISGN
ISALSAQLQG FIGENRDTMK PALDKLNGVL TILDNRKERL QKSLSLLNDY SMSLGESVSA
GPFFKTYVAN LLPGQFLQPF IDVAFSDLGL DPNVLLPSQR SDPQVGQPGT PAMPVPFPRT
GQGGEPRMTI PDAITGNPGD AGCGPPGIPL PGPTGCYPYR EPLPAPPPGG PPPGPPAVSP
PGLASTPTPD TGLLVPAPGE APPLVPVPGE GTR