Gene Mflv_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2063 
Symbol 
ID4973385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2141425 
End bp2142171 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID640456272 
Productpolysaccharide deacetylase 
Protein accessionYP_001133329 
Protein GI145222651 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0736381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGTG AATCCGGCGC GCTTGACGAC GCTCACCGTC GTCAAGCGCG CCCGATTCGC 
CGGCTGGGGG CGGTGGTGCT GGGGGTGATT ACCGTGTTCA CCGCGGCACC GACGGCGGCG
GCCGGCCCCG TCGACTGTGC GGCGGTACCC TGCGTGGCGC TGACGTTCGA CGACGGGCCC
GGCCCGCACA CCGACCGGCT GCTGGACGTC CTGCGTGCCC AGGGCGCGAA AGCCACGTTC
TTCGTGATCG GGGAGAAGGT GGCCGCCGAC CCGGCGGCGA CGCGCCGGAT CACCGGCGCG
GGCATGCAGG TCGGCAACCA CACCTGGCAG CACCTCGACA TGACCACGCT CGCGCCGCCC
GACGTCGCGG CCCAGTTCGC CAGGGCGACC GAGGCCATCG CCGCTGCTAC CGGGCAGCGG
ACACCGTTGG CGCGCACCGG GTTCGGCGCG ATCGACGACA GCGTGCTGGC CGAGGCGGGG
CGGCAGGGTC TGACCGCGGT CAACTGGGAC GTCAACCCGC GCGACTGGCA CCACGACGCC
GACCCGGACG CCATCCGGGA CGCGGTGCTG ACGCAGGTGC GGCCGGGGGC GGTGGTCCTG
CTGCACGACA CCGTCGCCGC GACGGTGGGC GCGATGGCCG ACGTCGTCCC CGCGCTGCGG
GCGCGCGGAT ATCACCTCGT GACGGTGTCG CAGCTACTCG GGCCGCTGAC GCCGGGCAGC
CTCTACGGCA GCCGCGAGCG GGCCTGA
 
Protein sequence
MTSESGALDD AHRRQARPIR RLGAVVLGVI TVFTAAPTAA AGPVDCAAVP CVALTFDDGP 
GPHTDRLLDV LRAQGAKATF FVIGEKVAAD PAATRRITGA GMQVGNHTWQ HLDMTTLAPP
DVAAQFARAT EAIAAATGQR TPLARTGFGA IDDSVLAEAG RQGLTAVNWD VNPRDWHHDA
DPDAIRDAVL TQVRPGAVVL LHDTVAATVG AMADVVPALR ARGYHLVTVS QLLGPLTPGS
LYGSRERA