| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2030 |
|---|
| Symbol | |
|---|
| ID | 4973352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2108676 |
|---|
| End bp | 2109677 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640456239 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_001133296 |
|---|
| Protein GI | 145222618 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.220697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCG CACTGGCTCT GGGAAGCGGT GGGGCGCGCG GCTATGCCCA CATCGGGGTC
CTCAACGAGT TGCGCGAACG CGGCCATGAG GTCGTCGGTA TCGCCGGGTC CTCGATGGGA
GCGCTCGTCG GGGGCCTGGA GGCCGCGGGT AAGACCGATG AATTCACGTT GTGGGCAACG
TCTTTGACCC AACGCGCGGT GTTACGACTC CTCGACCCGT CCATCTCGTC GCCCGGGGTG
CTGCGGGCCG AGAAGATCCT GGAGTCCGTC CGGGACATCC TGGGCGAGGT CACCATCGAG
GATCTGCCCA TTCCGTACAC CTCGGTGGCC ACGGATCTGA TCACCGGCAA GTCGGTCTGG
ATGCAGCGCG GACGGGTCGA CGACGCGATC CGCGCGTCGA TCGCGATTCC GGGGTTGATC
ACCCCGCATG TGCTCGGCGG TCGCCTGCTC GCCGACGGGG GGATCCTCGA TCCGTTGCCG
ATGGCGCCGA TCGCCGCCGC CCCCGCCGAC ATCACCATCG CCGTCAGCCT CTCGGGTGAG
GACCCCGCCG TCGACCGCCG CATGCAGGAC CTCCGGCAGC CGACCACGGA CTGGCTCAGC
CGCATGTGGC GGTCCAGTTC GTCGCTGCTC GACACGAAGG CCGCACGATC CCTGCTGGAG
ACACCTACCG GGCGCGCGGT GCTCGGCCGA TTCGTGGCGG CCGACGACGA GCCCATCGAC
GCACCGCCCG AGGTCGTCAA GCACGACTCC GCCGACGCGA CGGGCGTTCC CGAACTGCCC
AGGCTGGGAA GCTTCGAGGT GATGAACCGC GTCATCGACA TCGCCCAGTC GGCGCTGGCA
CGCCACACGC TGGCCGCCTA TCCCCCGGAC CTGCTCATCG AGGTCCCCCG CACGGTGTGC
CGCAGCCTCG ACTTCCACCG CGCGCACGAG GTGATCGAGA TCGGACAGGA ACTCGCCAGT
GCGGCGCTGG AGGCGCTGGA CCCGGAACCG TCAGAGGCCT GA
|
|---|
| Protein sequence | MRVALALGSG GARGYAHIGV LNELRERGHE VVGIAGSSMG ALVGGLEAAG KTDEFTLWAT
SLTQRAVLRL LDPSISSPGV LRAEKILESV RDILGEVTIE DLPIPYTSVA TDLITGKSVW
MQRGRVDDAI RASIAIPGLI TPHVLGGRLL ADGGILDPLP MAPIAAAPAD ITIAVSLSGE
DPAVDRRMQD LRQPTTDWLS RMWRSSSSLL DTKAARSLLE TPTGRAVLGR FVAADDEPID
APPEVVKHDS ADATGVPELP RLGSFEVMNR VIDIAQSALA RHTLAAYPPD LLIEVPRTVC
RSLDFHRAHE VIEIGQELAS AALEALDPEP SEA
|
|---|
| |