Gene Mflv_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2021 
Symbol 
ID4973343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2100487 
End bp2100825 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID640456230 
Productanti-sigma-factor antagonist 
Protein accessionYP_001133287 
Protein GI145222609 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.60085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.594301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCAAT TCACCGAACG CGAGGTCGAC GGCGTGGTGA TCGTCGCGGC GGTCGGAGCC 
ATCGACATGC TGACGGCACC GCAGTTGCAG GAGGCCGTCG CCGCAGCTGC GCGGCGCAGG
CCGTCCGGTC TTGTCGTCGA CCTGACCTCG GTGGACTTCC TCGGGTCGGC CGGCATGCAG
GTGCTGATGG AGACCCGAAA AGGTCTCGAC GGCGACACCC GGTTCGCGGT AGTCGCCGAC
GGACCCGCGA CCAGCAGGCC GTTGAAGATC ACCGGGATCA CCGACTACGT CGACCTGTAC
CCGTCACTCG ACGTCGCTCT GGCAGATCTC GCAGGCTGA
 
Protein sequence
MQQFTEREVD GVVIVAAVGA IDMLTAPQLQ EAVAAAARRR PSGLVVDLTS VDFLGSAGMQ 
VLMETRKGLD GDTRFAVVAD GPATSRPLKI TGITDYVDLY PSLDVALADL AG