| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1998 |
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| Symbol | |
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| ID | 4973320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 2079607 |
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| End bp | 2081433 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640456207 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001133264 |
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| Protein GI | 145222586 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.89102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTG CACCAACCCT GAAGAAGGCC CTCAATCAGC GCCAGTTGAC GATGATCGCC
ATCGGCGGCG TCATCGGCGC CGGCTTGTTC GTCGGATCGG GCGTCGTCAT CGCAGACACC
GGGCCCGGTG CTTTCCTGAC GTACGGCATG GCCGGCGTGC TCATCATCAT GGTGATGCGG
ATGCTCGCCG AGATGGCCGT GGCCAACCCG TCGACAGGAT CGTTCGCGGA CTACTCGCGC
AATGCGTTGG GGCACTGGGC GGGATTCTCC GTCGGCTGGC TGTACTGGTA CTTCTGGGTC
ATCGTCGTCG GCTTCGAGGC GATCGCCGGG GCCAAGATCG TGCAGTACTG GATGGACGTG
CCGCTGTGGT TGTCCGCGTT GATTTTCATG GTGCTGATGA CGGCGACGAA CCTGTTCTCG
GTGGCCTCCT ACGGGGAGTT CGAGTTCTGG TTCGCCGGCA TCAAGGTGGC CGCGATCATC
GCGTTCATCG CGGTCGGCGC CGCATTCGTG TTGGGTCTGT GGCCCGGAAA GGGTGCGGAC
TTCTCGAACC TGACCAGTCA CGGCGGATTC ATGCCGTTGG GCTTCGGCGC GATCACCGTC
GGAATCGTCA CCGTCATCTT CTCGATGGTC GGCGCCGAGA TCGCGACGAT CGCCGCTGCC
GAGTCCCAGG ATCCCGAGCG GGCGGTGGCG AAGGCAGCCA ACTCGGTGAT CCTGCGCATC
CTGATCTTCT ACGTCGGGGC AGTGCTGCTG CTCGTGCTCA TCGTCCCGTG GAACGACGAG
AGTGTGTCGG CGTCGCCGTT CGTGGCTGCG TTCAACGCCA TGGGCATTCC GTACGCCGAC
CATGTGATGA ACGCCGTGGT GCTCACCGCG GTACTGAGCT GCCTGAACTC GGGCATGTAC
ACCGCTTCGC GCATGCTCTT CGTCCTGGCC GCCCGCAGGG AGGCGCCGGC GGCACTGGTC
AAGGTCACCA ACCGGGGCGT GCCGGCGAAC GCGATCCTGG CGTCCTCGGT CGTCGGCTTC
CTGTGCGTGA TCGCCGCCGC GGTCTCGCCG GACACCATCT TCGCGTTCCT GCTGAACTCC
AGCGGCGCGA TCATCCTCTT CGTCTACCTG CTGATCGCGA TCTCCCAGAT CGTCCTGCGC
TACCGCACCC CGGACTCGAA GCTCCGCGTG AAGATGTGGC TCTTCCCAGT GCTTTCCGGA
CTGACCGCGC TCGGCATCCT CGCCATCCTC GTACAGATGT TCATCGACAC CGCACTGCGC
TCGCAGCTGG TGCTGAGCCT GCTGTCCTGG GCGGTGGTCA TCGCGCTGTT CGCCGCGAAC
AAGTGGTTCG TGAAAAAGCG GCCGGCCGAG GGGGACAGCG GCGCCCCCAC CGGTCCACCG
CACCGAGTTC TGGTGCTGGC CAACCGAACC GTCGATTCCG ACGAGCTGCT CGCCGAGCTG
AGCCGGATCG GAGCGGATCA GACGGCGGAG TATCTGGTGG TGGTACCCGC CAGCGCCGTC
GACACCGGCG CGGCGGCCAC CCACGGTCCG CGCGACGTCA CCGAAGCCAC CCAGGAAGCG
GCCACCGCGC GCCTCGAATC CACGCTGGCG GCGCTGCGCG GCAAAAACCT GACCGTCCAG
GGTGAATTGG GTGATTACCG CCCACTGCGT GCACTCGACC ACGCCGTCGC GGAGTTCGGT
CCGGACCAGA TCGTCATCGC GACGCTGCCG CCGGAGTTCT CGATGTGGCA CCGGTTCGAC
GTCGTGGACC GGGCCCGTGC CCAGTTCACG GTGCCGGTGA CGCACGTCGT CGCCACGTCC
GCGGTGGGAA ACCAGGTGCC GCGATGA
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| Protein sequence | MSAAPTLKKA LNQRQLTMIA IGGVIGAGLF VGSGVVIADT GPGAFLTYGM AGVLIIMVMR
MLAEMAVANP STGSFADYSR NALGHWAGFS VGWLYWYFWV IVVGFEAIAG AKIVQYWMDV
PLWLSALIFM VLMTATNLFS VASYGEFEFW FAGIKVAAII AFIAVGAAFV LGLWPGKGAD
FSNLTSHGGF MPLGFGAITV GIVTVIFSMV GAEIATIAAA ESQDPERAVA KAANSVILRI
LIFYVGAVLL LVLIVPWNDE SVSASPFVAA FNAMGIPYAD HVMNAVVLTA VLSCLNSGMY
TASRMLFVLA ARREAPAALV KVTNRGVPAN AILASSVVGF LCVIAAAVSP DTIFAFLLNS
SGAIILFVYL LIAISQIVLR YRTPDSKLRV KMWLFPVLSG LTALGILAIL VQMFIDTALR
SQLVLSLLSW AVVIALFAAN KWFVKKRPAE GDSGAPTGPP HRVLVLANRT VDSDELLAEL
SRIGADQTAE YLVVVPASAV DTGAAATHGP RDVTEATQEA ATARLESTLA ALRGKNLTVQ
GELGDYRPLR ALDHAVAEFG PDQIVIATLP PEFSMWHRFD VVDRARAQFT VPVTHVVATS
AVGNQVPR
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