Gene Mflv_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1939 
Symbol 
ID4973263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2017215 
End bp2017886 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID640456148 
Product50S ribosomal protein L25/general stress protein Ctc 
Protein accessionYP_001133207 
Protein GI145222529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.581137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA ACGCCCCCAA CAATCTGACC GCACAGGTCC GCAGCACGAC CGGCAAGGGC 
GCCTCGCGCC GCGCCCGCCG CGAAGGCCGC GTCCCCGTGG TGCTGTACGG CCACGGCACC
GACCCCCAGC ACCTGGAGCT CGACGGCCGC GACTTCGCCG CCGTGCTCCG TCACGCCGGC
ACCAACGCCG TGCTGACCCT CGACATCGAC GGCACCGAGC AGCTCGCGCT GACCAAGGCG
ATCGAGATCC ACCCGATCCG CCGCAACATC CAGCACGCCG ACCTGCTGGT CGTGCGCAAG
GGCGAGAAGG TCACCGTCGA GGTCACCGTC ATCGTCGAGG GTGAGGCCGC ACCCGGCACG
CTCGTCACCC AGGACGCCAA CGTGGTCGAG ATCGAGGCCG ACGTGCAGTC GATCCCCGAG
CAGTTCACCG TGTCGGTCGA GGGCGCCGAA GAGGGCACCC AGATCCTGGC CGGCCAGATC
GAGCTGCCCA GCGGCGTGAC GCTGATCGCG GACCCGGAGA CGCTGGTCGT CAACGTCGTC
GCGGCCCCGA CCGCCGAGGA CCTGGAGTCC GAGGGCGGCG GCGAATCGGC CGAGGAGGCC
GCCGAGGGCG CCGACGAAGC CGCCGAGGGC GAGGGCGCGT CCGAGGGCGA AGCCGCCGCC
GAGTCCGAGT AG
 
Protein sequence
MAKNAPNNLT AQVRSTTGKG ASRRARREGR VPVVLYGHGT DPQHLELDGR DFAAVLRHAG 
TNAVLTLDID GTEQLALTKA IEIHPIRRNI QHADLLVVRK GEKVTVEVTV IVEGEAAPGT
LVTQDANVVE IEADVQSIPE QFTVSVEGAE EGTQILAGQI ELPSGVTLIA DPETLVVNVV
AAPTAEDLES EGGGESAEEA AEGADEAAEG EGASEGEAAA ESE