| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1927 |
|---|
| Symbol | |
|---|
| ID | 4973251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2003369 |
|---|
| End bp | 2004265 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640456136 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001133195 |
|---|
| Protein GI | 145222517 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG CGCCGGGTGA CGAACACGCC GAGAGGTTCA CGCAGCTGCG ACCGCTGCTG
TTCACGATCG CCTACGAGAT CCTGGGCAGC GCAACCGAAT CCGACGACGT GCTGCAGGAG
AGTTACCTGC GCTGGGCCGA GGTGGACCTT GCCACGGTCA CCGACACCAA GGCCTATCTC
GCCCGGCTCG TCACCCGGCA GGCCCTCAAC ACGTTGCGCG CGCAGTCCCG CCGCCGGGAG
GACTACGTCG GACCCTGGCT GCCGGAACCT CTCCTGACCG AGGCTGATCC CTCCGCCGAC
GTGGTGCTGG CCGAGTCGGT GTCGATGGCG ATGCTCGTGG TGCTGGAGAC CCTGAGCCCC
GACGAGCGGG CGGTGTTCGT GCTGCGCGAG GTGTTCGGCT TCGGGCACGA CGAGATCGCG
GCGACGCTGG GCAAGTCGAC GGCCGCGGTC CGCCAGATCG CACACCGGGC CCGCGAGCAC
GTGCAGTCGC GGCGCAAGCG GTTCGAACCC GTCGACCCGA AGACCTCCGG CGAGATCACC
ATGACGTTCT TCGCCGCGGC GGCCACCGGC GACTTGGACG CGCTGATGGC GATGCTGGCG
CCCGACGTGG TGTGGACCGC CGACAGCGAC GGCAAGGTCA GCGCGGCGCG GCGTCCGGTG
GAAGGTGCCG ACAAGGTGGC CCGCCTCATC CTGGGCTTCG TCCGGCTCGC CGGCGGCGAG
GCCAGGGTCG AGCCCGCGTT CTACAACAGT GCGCCCGCGC TGGTGCTCTA TACGGGCGAC
GTGCTGGAGG GCGTGGTGAC GTTCGAGGTG GCCGACGGCC GGATCACCAA CTTCTACGCG
ATGCGCAATC CGGAGAAACT GACAGGGGTG ATGGTGGCGC GCACCATCAG CCGATAA
|
|---|
| Protein sequence | MTAAPGDEHA ERFTQLRPLL FTIAYEILGS ATESDDVLQE SYLRWAEVDL ATVTDTKAYL
ARLVTRQALN TLRAQSRRRE DYVGPWLPEP LLTEADPSAD VVLAESVSMA MLVVLETLSP
DERAVFVLRE VFGFGHDEIA ATLGKSTAAV RQIAHRAREH VQSRRKRFEP VDPKTSGEIT
MTFFAAAATG DLDALMAMLA PDVVWTADSD GKVSAARRPV EGADKVARLI LGFVRLAGGE
ARVEPAFYNS APALVLYTGD VLEGVVTFEV ADGRITNFYA MRNPEKLTGV MVARTISR
|
|---|
| |