Gene Mflv_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1842 
Symbol 
ID4973166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1912782 
End bp1913327 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content71% 
IMG OID640456050 
Productisopentenyl-diphosphate delta-isomerase 
Protein accessionYP_001133110 
Protein GI145222432 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID[TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.743042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG AGCAGGTGGT TCTTCTCGAT CCCGACGGCA GCAGCGTGGG CACGGCCGCG 
AAGTCCACGG TGCACCACGG TGACACCCCC CTACACCTCG GTTTCTCGTG CTACCTGTTC
GATTCGTCGG GGCGCGTGCT GCTGACGCGT CGGGCGCTCG GCAAGAAGAC CTGGCCCGGG
GTGTGGACGA ACTCCTTCTG CGGCCACCCC GCCCCGGGTG AGGACGTCAC CGACGCCGTG
CACCGACGCG CCGGGCGCGA ACTGGGAGCC GCGCTGGCCG ACGTCGTGTG CGTACTGCCC
GACTTCCGCT ACTGGGCGCG TGCCGCCGAC GGTACGGTCG AGAACGAGAT CTGCCCGGTG
TTCTGTGCGC TGATCGACGG GACCGTGTCC CCGGCCCCGG ACGAGGTGAT GGACCTGGAG
TGGGTGGAAT GGAGCGACCT GCGCTCGGCC GCCGCGCTGC GGTGGGCTAT CAGTCCGTGG
GCGCAGAGCC AGGTGCCGCT GCTGGAGGCT GCCGGTCTCC CCGGGTGGGC TCGGGTAGCG
GTCTGA
 
Protein sequence
MSDEQVVLLD PDGSSVGTAA KSTVHHGDTP LHLGFSCYLF DSSGRVLLTR RALGKKTWPG 
VWTNSFCGHP APGEDVTDAV HRRAGRELGA ALADVVCVLP DFRYWARAAD GTVENEICPV
FCALIDGTVS PAPDEVMDLE WVEWSDLRSA AALRWAISPW AQSQVPLLEA AGLPGWARVA
V