| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1828 |
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| Symbol | |
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| ID | 4973152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 1897531 |
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| End bp | 1899831 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640456036 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001133096 |
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| Protein GI | 145222418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGACC GTTATGACCG GGTGAAGCTG ACCAACCCGG ACAAGGTGCT GTATCCGGCC
AGCGGCACCA CCAAAGCGCA GGTCTTCGAG TACTACGTGA ATGTCGCCGA GGGCATGCTG
CCACACATCG CCGGACGTGC CGTGACACGT AAGCGGTGGC CGAACGGCGT CGAGGAGTCG
TCGTTCTTCG AGAAGCAGCT CGCGTCGTCG GCGCCGGACT GGCTGGACCG CGGCACCATC
GCGCACAAGT CCGGCACCAC CACCTATCCG GTCATCGACA CCGTCGAGGG GCTGGCCTGG
ATCGCGCAGC AGGCGGCGCT GGAGGTGCAC GTTCCGCAGT GGCGGTTCAC CCGGGGCGGG
CAGAGTGGGG CGGCTGACGG CGGGGACGGA AAGCCGGGGC CGGCGACGCG GATCGTGTTC
GACCTCGACC CCGGCGAGGG TGTCACGTTC CGTCAGCTCT GCGAGGTCGC CCACGAGGTG
CGCGAGCTCA TCACCGACAT CGGGCTCACG ACGTTCCCGC TGACCAGCGG AAGCAAGGGC
CTTCATCTGT ACGTCCCGCT GGAGGACCCG ATCAGTTCCC GCGGGGCGTC GGTGCTCGCC
AAGCGCGTGG CGCAACAGCT CGAGCAGAGC ATGCCCAAGC GGGTCACCGC GACGATGACC
AAGAGCCTGC GCGACGGCAA GGTGTTTTTG GACTGGAGTC AGAACAACGG CAACAAGACC
ACGATCGCGC CGTACTCGCT TCGTGGACGG GAACGTCCGA CGGTCGCCGC TCCCCGGACG
TGGGATGAGA TCGAGGACCC GGACCTGCGT CACCTGACCT TCGACGAGGT GCTCGACCGG
TTGGAGCGCG ACGGTGACCT GCTCGCCGAC CTCGACCCGC CATTGCCGGC CACCGACAAG
CTCACCCGTT ACCGCAGCAT GCGAGACCGC ACGAAGACGC CGGAGCCGGT GCCCGCTGAG
CCGCCCGAGA CCGGCGCGAA CGACAAGTTC GTGATCCAGG AGCACCATGC GCGGCGGTTG
CACTACGACT TCCGGCTGGA GCGTGACGGT GTCCTGGTGA GTTGGGCGGT ACCGAAGAAC
CTTCCCGACA CCCCGTCGGT CAATCACCTT GCGGTGCACA CCGAAGACCA TCCGATGGAC
TACATCGACT TCGCCGGCGA GATCCCGAAA GGGGAGTACG GCGGCGGCGA GGTCCACATC
TGGGATACCG GCACGTACGA GACGGAGAAG TTCCGCGACA ACCCGCCCGA TGGACCGGCC
AAGGGCGGCG AGGTGATCGT CACGCTGCAC GGTCAGAAGA TCGAGGGCCG GTACGCGTTG
ATCCAGACCG ACGGCAAGAA CTGGCTCGCG CACCGGATGA AGGACCAGCA GAAGCCGACC
GCGGCCGACC TGGCGCCGAT GCTGACCACC GAGGGATCGG TGGAGCGACT CACCAGGGGC
CAATGGGCGT TCGAGGGGAA ATGGGACGGC TATCGGCTCC TGGTCGACGC CGACCACGGC
AAGCTGACGC TGCGGTCTCG GCGGGGCCGT GACGTCACCG CCGAATACCC GCAGTTGAAG
GCGCTCGCCG CCGACCTGGC CGACCATCAC GTGATTCTCG ACGGGGAGGC GGTGGCGCTC
GACGAGGACG GGGTTCCGAG TTTCGGTGAG ATGCAGAACC GGGCCCGGTC GACGCGGGTC
GAGTTCTGGG CGTTCGACAT CCTGTTCCTC GACGGCCGGT TGCTGACCAA GGCCACGTAT
ACCGATCGGC GAAAGCTGTT GGAGGCGTTG GCCGAAGGCG GAGGATTGAT CGTTCCACCC
GCCCTTGAGG GGGACGGGCC CGAGGCGCTG GAGTACGCCA GATCTCAGCG GTGGGAGGGC
GTGATCGCCA AAAAACGGGA CTCCACGTAT CAGCCGGGCC GGCGGTCCTC GGCCTGGATC
AAGGACAAGA TCTGGAACAC CCAGGAAGTG GTGATCGGCG GGTGGCGCCA GGGTGAAGGT
GGGCGCACGA GCGGGATCGG GGCGCTCGTG CTCGGAGTGC CCGACGACGA CGGACTGCAC
TTCGTCGGAC GTGTCGGCAC CGGGTTCACC GACAAGCAGC TGGCGTCGTT GAAGAAGACT
CTGGAGCCGC TGCGCACCGA CGAATCACCC TTCGCGGCAG AGCTTCCCAA GCAGGACGCC
AAGGGGGTGA CGTTCGTGCG GCCGGAACTG GTGGGGGAGG TGCGCTACAG CGAGCGCACG
TCCGACGGTC GTCTGCGGCA GGCGAGCTGG CGCGGTCTGC GCGACGACAA GGTTCCCGAG
GATGTTCGGT GGGAGGGGTA G
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| Protein sequence | MVDRYDRVKL TNPDKVLYPA SGTTKAQVFE YYVNVAEGML PHIAGRAVTR KRWPNGVEES
SFFEKQLASS APDWLDRGTI AHKSGTTTYP VIDTVEGLAW IAQQAALEVH VPQWRFTRGG
QSGAADGGDG KPGPATRIVF DLDPGEGVTF RQLCEVAHEV RELITDIGLT TFPLTSGSKG
LHLYVPLEDP ISSRGASVLA KRVAQQLEQS MPKRVTATMT KSLRDGKVFL DWSQNNGNKT
TIAPYSLRGR ERPTVAAPRT WDEIEDPDLR HLTFDEVLDR LERDGDLLAD LDPPLPATDK
LTRYRSMRDR TKTPEPVPAE PPETGANDKF VIQEHHARRL HYDFRLERDG VLVSWAVPKN
LPDTPSVNHL AVHTEDHPMD YIDFAGEIPK GEYGGGEVHI WDTGTYETEK FRDNPPDGPA
KGGEVIVTLH GQKIEGRYAL IQTDGKNWLA HRMKDQQKPT AADLAPMLTT EGSVERLTRG
QWAFEGKWDG YRLLVDADHG KLTLRSRRGR DVTAEYPQLK ALAADLADHH VILDGEAVAL
DEDGVPSFGE MQNRARSTRV EFWAFDILFL DGRLLTKATY TDRRKLLEAL AEGGGLIVPP
ALEGDGPEAL EYARSQRWEG VIAKKRDSTY QPGRRSSAWI KDKIWNTQEV VIGGWRQGEG
GRTSGIGALV LGVPDDDGLH FVGRVGTGFT DKQLASLKKT LEPLRTDESP FAAELPKQDA
KGVTFVRPEL VGEVRYSERT SDGRLRQASW RGLRDDKVPE DVRWEG
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