Gene Mflv_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1825 
Symbol 
ID4973149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1894605 
End bp1895396 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID640456033 
Productshort chain dehydrogenase 
Protein accessionYP_001133093 
Protein GI145222415 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTGG ACCGGTTCCG GCTCGACGAT CAGGTGGCGG TGGTGACCGG GGCCGGCCGC 
GGTCTCGGCG CCGCGATGGC CCTCGCGTTC GCCGAAGCAG GCGCTGACGT GCTGATTGCC
GCGCGCACGC AATCGCAGCT GGAGGCGGTG GCCGAACAGA TCGCAGGCAC CGGGAGGCGC
GCCCACATCG TCGTCGCCGA TCTCGCCCGT CCCGAGGACA CCGCGGGTCT CGCCGCGCAG
GCAGTCGAGG CGTTCGGCAG GCTAGACATC GTCGTCAACA ACGTCGGCGG CACCATGCCC
AACGCGCTGT TGAACACCTC GACGAAGGAC ATGCGCGACG CGTTCACCTT CAACGTGGCG
ACTGCTCACG CATTGACGAC GGCCGCGGTG CCGCTGATGC TCGAACACTC CGGCGGCGGC
AGCATCATCA ACATCACCTC CACGATGGGC CGCGTCGCCG GGCGCGGTTT CGCCGCCTAC
GGCACGGCGA AGGCCGCGCT GGCGCACTAC ACCCGACTGT CGGCACTCGA CCTCGCGCCG
CGCATCCGCG TCAACGCGAT CGCCCCGGGA TCCATCTTGA CCTCCGCGCT GGAGATCGTC
GCCAGCAACG ACGACCTGCG TGACCCGATG GAGAAGGCCA CCCCGATGAA GCGTCTCGGC
GACCCGCTCG ACATCGCCGC TGCCGCTGTG TATCTCGCGT CGCCGGCCGG GTCGTATCTG
ACCGGCAAGA CCCTCGAGGT CGACGGCGGC ATCACGTTCC CGAACCTCGA ACTTCCCATC
CCCGATCTGT GA
 
Protein sequence
MILDRFRLDD QVAVVTGAGR GLGAAMALAF AEAGADVLIA ARTQSQLEAV AEQIAGTGRR 
AHIVVADLAR PEDTAGLAAQ AVEAFGRLDI VVNNVGGTMP NALLNTSTKD MRDAFTFNVA
TAHALTTAAV PLMLEHSGGG SIINITSTMG RVAGRGFAAY GTAKAALAHY TRLSALDLAP
RIRVNAIAPG SILTSALEIV ASNDDLRDPM EKATPMKRLG DPLDIAAAAV YLASPAGSYL
TGKTLEVDGG ITFPNLELPI PDL