| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1807 |
|---|
| Symbol | |
|---|
| ID | 4973131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 1879640 |
|---|
| End bp | 1881178 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640456014 |
|---|
| Product | carotenoid oxygenase |
|---|
| Protein accession | YP_001133075 |
|---|
| Protein GI | 145222397 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.581411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCG GCACCCATCC CGAAGTCGTG GGCAAGTTCC TGTCCACGCT GCCCGAGGAT
GACGACCACC CCTACCGCAC CGGCCCGTGG CGCCCGCAGA CCACCGAGTG GGACGACGAC
GACCTCAGAG TCGTCGAAGG CCAGATCCCC GGCGATCTCG ATGGCGTGTA CCTGCGCAAC
ACCGAGAATC CGCTGCACCC GGCCCTGAAG TACTACCACC CGTTCGACGG TGACGGCATG
CTGCACATGG TCGGCTTCCG CGACGGAAAA GCCTTCTACC GCAACCGGTT CGTCCGCACC
GACGCCCTCG CCGCGGAGAA CGAGGCCGGC GGCCCGCTGT GGCCCGGGAT CGCCGAGCCG
ATCGAGTTGG CCAAACGCGA CTACGGCTGG GGCGCACGCA CTCTGATGAA GGACGCGTCG
TCCACCGACG TGATCGTGCA TCGGGGCGTC GCGCTGACGA GCCACTACCA GTGCGGCGAC
CTGTACCGCA TCGACCCGTG CACCGGCGCG GATCTCGGCA AGGAGGACTG GAACGGCGGG
TTCCCCACCG ACTGGGGGGT GTCCGCGCAC CCGAAGGTCG ACGACCGCAC CGGCGAGCTG
TTGTTCTTCA ACTACAGCAA GCAGGCGCCG TTCATGCGCT ACGGAGTGGT CAGCCCCGCC
GGCGACGTGG TGCACAACGT GGACGTACCG CTGCCGGGTC CGCGCCTGCC GCACGACATG
GCCTTCACCG AGAACTACGT GATCCTCAAC GACTTTCCGC TGTTCTGGGA CACCGGGCTG
CTCGAACACA ACATCCACCT GCCGCGCTTC CACCGCGATG TGCCGTCCCG CTTCGCAGTG
CTCCCCCGCC GCGGTGACAC CTCGCAGATC ATGTGGTTCG AGGCCGACCC GACCTACGTC
CTGCACTTTC CCAACGCCTT CGAGGACGGC GACGAGATCG TGCTCGACGG GTTCTTCCAG
GGCGACCCGG AACCCACCCA GGGCGTCGAC AACGGCATGA GCCGTAAATG GCAGCAGATC
TTCCGGTCCC TGTCCCTCGA CGGGATGCAG ACCCGGCTGC ACCGGTGGCG GTTCAACCTG
AAGACCGGCG CGGTGCGCGA GGAGCACCTG TCCGACAGTT TCACCGAATT CGGCATGATC
AACCCCGGCT TCTCGGGACG TCCCCACCGG TACACGTACG CCGAGACCGG CAAGCCCGGG
TGGTTTCTGT TCGACGGCCT GGTCAAGCAC GACCTGCACA CCGGCACCGA GCAGAGATTC
ACCTTCGACG ACGGCGTTTT CGGCAGCGAG ACGGCGATGG CGCCGCGCGT GGGCGGCACG
GATGAGGACG ACGGCTACCT CGTCACGCTG ACCACCGACA TGAACACCGA CGCGTCGTAC
TGCCTGGTGT TCGACGCGGC TCGCGTCGGC GACGGCCCGG TGTGCAAACT TCAACTGCCC
GAGCGTATCT CCAGCGGTAC GCACTCGACC TGGGCGGCGG GTTGCGACCT GCCGCGGTGG
CGCGACAGCG AGTCGGCGGC CGGGGCGATC GGGCTCTAG
|
|---|
| Protein sequence | MTAGTHPEVV GKFLSTLPED DDHPYRTGPW RPQTTEWDDD DLRVVEGQIP GDLDGVYLRN
TENPLHPALK YYHPFDGDGM LHMVGFRDGK AFYRNRFVRT DALAAENEAG GPLWPGIAEP
IELAKRDYGW GARTLMKDAS STDVIVHRGV ALTSHYQCGD LYRIDPCTGA DLGKEDWNGG
FPTDWGVSAH PKVDDRTGEL LFFNYSKQAP FMRYGVVSPA GDVVHNVDVP LPGPRLPHDM
AFTENYVILN DFPLFWDTGL LEHNIHLPRF HRDVPSRFAV LPRRGDTSQI MWFEADPTYV
LHFPNAFEDG DEIVLDGFFQ GDPEPTQGVD NGMSRKWQQI FRSLSLDGMQ TRLHRWRFNL
KTGAVREEHL SDSFTEFGMI NPGFSGRPHR YTYAETGKPG WFLFDGLVKH DLHTGTEQRF
TFDDGVFGSE TAMAPRVGGT DEDDGYLVTL TTDMNTDASY CLVFDAARVG DGPVCKLQLP
ERISSGTHST WAAGCDLPRW RDSESAAGAI GL
|
|---|
| |