| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1687 |
|---|
| Symbol | |
|---|
| ID | 4973013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 1751906 |
|---|
| End bp | 1753147 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640455896 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001132957 |
|---|
| Protein GI | 145222279 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA CGCGTCCCAC CCTGGCACTC TTGGCGGCTG TCGCCGTCCT CACCGTCGGC
TGCGGCAGCC GCGCCGGTGA CGAGGCTGCC GCTCCCGCGG CGGAAAGCTG CGTCGACACC
ACCGGTGACA CCGTCAAGGT AGGCGCCATC AACTCCCTCT CGGGCGGTCT GGCCGTCAGT
GAGACGGTCA TCCGCGACGC GATCACCCTG GCCGTCGAGC AGGTCAACGC CGGCGGCGGA
GTGCTGGGCA AGCAGCTCAC GCTGATCGGC GAGGACGGCG CGTCGGAACC GACCATCTTC
GCCGAGAAAG CGCAGAAACT CGTCCAGTCC GATTGTGTCG CTGCAGTATT CGGCGGATAC
ACCTCGGCCA GCCGCAAGGC GATGCTGCCG GTCTTCGAGG ACAACAACGC GCTGCTCTAC
TACGGCCAGC AGTACGAAGG TCTGGAGAGC TCCCCCAACA TCTTCTACAC CGGGGCCACC
ACCAACCAGC AGATCATCCC GGCCCTGGAC TACCTCAAGG AACAGGGGGT GAAATCCCTC
TACCTCGTCG GCAGCGACTA TGTCTTCCCG CGCACCTCGA ATGCGATCGT CAAGGCCTAT
GCGCAAGCCA ATGGTATCGA GATCAAGGGC GAGGACTACA CGCCGCTGGG CAGCACCGAC
TTCTCGACCA TCGTCAACAA GATCCGTACC GCCGACGCCG ACGCGATCTT CAACGTCGTG
GTCGGCGACT CGCTCAACGC GTTCTTCCGC GAATACCGCA GCGCGGGCCT GACCGCGGAG
GAGATGCCGG TGATGTCGAT GTGCGTCGGC GAGGAAGAGG TCCGCAGCAT CGGTGCGCCG
ACCCTTGTCG GTCAGTTGTC GTCGTGGAAT TACTACCAGA CGCTGGACTC GCCGGCGAAC
ACGACGTTCG TCGAGGACTT CAAGGCGCGG TTCGGCGCCG ACCGGGTCAC CTCGGATCCG
ATGGAATCGG CCTATGCCGC CGTGCTGCTG TGGAAAGCGA CTGTGGAGAA AGCCAATTCG
TTCGCGGTGC CCGACATTCA AGAGGCCGCC GGCGGCGTGA CGGTCGACGT GCCGGAAGGA
ACGATGACCC TCGACGGGGA GAACCACCAC GTGACCAAGA CGGCACGCAT CGGCCGGGTC
GCCGACGACG GCCTGATCTA CCAGGTGTGG CAGTCCCCGG CACCCATCGA GCCGGATCCG
TACCTGAAGG ACTACCCGTG GGCCGCCGGG ATCACAGGCT GA
|
|---|
| Protein sequence | MKRTRPTLAL LAAVAVLTVG CGSRAGDEAA APAAESCVDT TGDTVKVGAI NSLSGGLAVS
ETVIRDAITL AVEQVNAGGG VLGKQLTLIG EDGASEPTIF AEKAQKLVQS DCVAAVFGGY
TSASRKAMLP VFEDNNALLY YGQQYEGLES SPNIFYTGAT TNQQIIPALD YLKEQGVKSL
YLVGSDYVFP RTSNAIVKAY AQANGIEIKG EDYTPLGSTD FSTIVNKIRT ADADAIFNVV
VGDSLNAFFR EYRSAGLTAE EMPVMSMCVG EEEVRSIGAP TLVGQLSSWN YYQTLDSPAN
TTFVEDFKAR FGADRVTSDP MESAYAAVLL WKATVEKANS FAVPDIQEAA GGVTVDVPEG
TMTLDGENHH VTKTARIGRV ADDGLIYQVW QSPAPIEPDP YLKDYPWAAG ITG
|
|---|
| |