| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1676 |
|---|
| Symbol | |
|---|
| ID | 4973002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 1742240 |
|---|
| End bp | 1742845 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640455885 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001132946 |
|---|
| Protein GI | 145222268 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.257121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGGC CTGCCCAGAC GGTGCGCAGC GAGCGTACGC GGGAAGCGCT GCGGCAGGCC
GCGGTGGTGC GGTTCCTCGC GCAGGGCGTG GAGGAGACCA CGGCCGAACA GATCGCCGCC
GATGCCGGGG TGTCCCTGCG GACGTTCTAC CGGCACTTCG CCTCCAAGCA CGATCTGCTG
TTCGCCGATT ACGACGCCGG ACTGCACTGG TTCCGGGCCG CGTTGGCGAC GCGGTCACCC
GAGGATCCGA TCCTCGACAC GGTGCAGGCC GCGATCATGG CTGCGCCCTA CGACGATTGG
GCTGTCACCA AGATCGCCGC GATGCGCTCG CAGGAACTCG ACGCCGGCCG GATCGTGCGC
CACATCCGCC AGGTGGAAGC CGATTTCGCC GACGCGATCG ACGAGCACCT GGCCAGGGCC
GACGGTGCGT CGCCGGGCAC CGACGAACGG ATGCGCACCA CCGTCACCGC GCGCTGCATC
GCCGCGGCGG TGTTCGGGGC GATGGAGGTG TGGATGCTCG GCGAGGACAG TTCCCTGCCG
GAGCTCGACC GGTTGTGCCG GCATGCGCTC GATTTGTTGC GCACCGGGAT CGCAGACCCG
GCCTGA
|
|---|
| Protein sequence | MVRPAQTVRS ERTREALRQA AVVRFLAQGV EETTAEQIAA DAGVSLRTFY RHFASKHDLL
FADYDAGLHW FRAALATRSP EDPILDTVQA AIMAAPYDDW AVTKIAAMRS QELDAGRIVR
HIRQVEADFA DAIDEHLARA DGASPGTDER MRTTVTARCI AAAVFGAMEV WMLGEDSSLP
ELDRLCRHAL DLLRTGIADP A
|
|---|
| |