Gene Mflv_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1667 
Symbol 
ID4972993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1733368 
End bp1734735 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content69% 
IMG OID640455872 
ProductnifR3 family TIM-barrel protein 
Protein accessionYP_001132937 
Protein GI145222259 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCATC TTCGAACGCG AGGACTTCAA CGGCGAGAGC GCCCGGATGC GCGACGAGAT 
CGGCGCGCAC GTCGAGGAGC TGCAGGAGAC GGTCCAGAAG TTCGAGATCG CCAAGCAGCG
CCGCGAGGAG CGGCTGCGTC AGATGGCCGA GAAGAAGGCC GCCAAGAATC TGCTGGTGGG
ATCATCAGCC TCGTAACAGA CACTCCGGGC TGCGAAGGTC GAACGGCCCG ATCCCTGCGG
ATCGGGCCGT TCGACCTTCG CAGCCCGGTC GTCCTAGCCC CGATGGCCGG GGTGACCAAC
GTCGCCTTCC GCACGCTGTG CCGCGAACTC GAGCTCAGCC GCGCCGGCAC GGTCAGCGGA
CTCTACGTGT GCGAGATGGT CACCGCCCGC GCGCTCGTCG AACGGCATCC GGTGACGATG
CACATGACGA CGTTCGCGCC CGAGGAGTCC CCGCGCTCGC TGCAGCTCTA CACCGTCGAT
CCGGTCAACA CCTACGCCGC CGCGAAGATG ATCGTCGACG AGAACCTCGC CGACCACATC
GACATGAACT TCGGTTGCCC GGTCCCCAAG GTCACCCGCC GCGGAGGCGG GGCCGCGCTG
CCCTACAAGC GGCGGCTGTT CGGACAGATC GTGAGTGCGG CGGTCCGTGC CACCGAAGGC
ACCGACATCC CGGTCACCGT GAAGTTCCGC ATCGGCATCG ACGACGAGCA CCACACCCAC
CTCGACGCCG GACGCATCGC CGCCGAGGAG GGCGCGGCCG CAGTCGCTCT GCACGCCCGC
ACCGCTGCCC AGCGTTACTC CGGAAGTGCC GACTGGGACC AGATCGCCGC GCTGAAGGCC
CACGTCACGA ATGTTCCGGT GCTGGGAAAC GGTGATATCT TCGACGCTCG TGACGCGCTG
GCCATGATGG CCGCGACGGG ATGCGACGGA GTCGTGATCG GTCGTGGCTG CCTGGGACGG
CCCTGGCTGT TCGCCGAGTT GTCCGCGGCG TTCACCGGCG CGACCCCGGC CACCCCGCCG
ACACTCGGCG AGGTCGCGCA GATCATTCGC AGACACGGCG AGCTTCTCGC TGCGCACTTC
GGAGAGGACA AAGGCATGCG GGACATCCGC AAGCACGTCG CGTGGTACAT GCACGGCTTC
CCGGCCGGCG CGGACCTGCG CCGGTCGATG GCCCTGGTCA AGACGATCTC GGAGCTCGAC
GACCTGCTCG AACAGCTCGA CCCCGACGTC CCGTTCCCGG CAGCCGCCAA CGGGCCCCGC
GGCCGGCAGG GTTCGGCGGC CTCGGTCACC CTCCCCGAAG GGTGGCTCGA CGACCCGGAC
GACTGCACCG TCCCGGCGGG CGCCGACGTG ATGCATTCCG GCGGCTGA
 
Protein sequence
MAHLRTRGLQ RRERPDARRD RRARRGAAGD GPEVRDRQAA PRGAAASDGR EEGRQESAGG 
IISLVTDTPG CEGRTARSLR IGPFDLRSPV VLAPMAGVTN VAFRTLCREL ELSRAGTVSG
LYVCEMVTAR ALVERHPVTM HMTTFAPEES PRSLQLYTVD PVNTYAAAKM IVDENLADHI
DMNFGCPVPK VTRRGGGAAL PYKRRLFGQI VSAAVRATEG TDIPVTVKFR IGIDDEHHTH
LDAGRIAAEE GAAAVALHAR TAAQRYSGSA DWDQIAALKA HVTNVPVLGN GDIFDARDAL
AMMAATGCDG VVIGRGCLGR PWLFAELSAA FTGATPATPP TLGEVAQIIR RHGELLAAHF
GEDKGMRDIR KHVAWYMHGF PAGADLRRSM ALVKTISELD DLLEQLDPDV PFPAAANGPR
GRQGSAASVT LPEGWLDDPD DCTVPAGADV MHSGG