Gene Mflv_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1560 
Symbol 
ID4972886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1631352 
End bp1632512 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID640455764 
Productvirulence factor Mce family protein 
Protein accessionYP_001132830 
Protein GI145222152 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC GCGTACTCGG GGTGTCGTCG GTCGCGCTGC TGCTGAGCGG CTGCCAGTTC 
GGTGGTCTGA ACTCGCTGAA CATGCCCGGC ACCGCCGGAC ACGGCAGCGG CTCCTTCGAT
GTCAGCGTCC AGTTGCCCGA CGTGTCCACA CTGCCGCAGA ACTCGCCGGT GATGGTCGAC
GACGTCACCG TGGGCAGTGT GTCCGGTGTG GAGGCGGTGC AGCGCGAGGA CGGCACCTTC
TTCGCCGAGG TCCAGCTCTC CCTCGACGGA AACGTGAAGC TACCGGCCAA CGCGACGGCC
AAGGTCGCCC AGACCTCGTT GCTCGGCTCG CAGCACATCG AGTTGGCCCC GCCCGCAGAC
GGATCGGGAA CAGGCGAGTT GGTGGAGGGT TCGCGGATCC CGATCGACAA CACGGCCAAC
TACCCGACGA CCGAGCAGGT GCTGTCCTCG CTCGGCGTGG TGGTCAACAA GGGTAATCTC
GGTGCGCTGC AGGACATCAC CGACGAGACC TACAACGCCG TGGTGGGGCG TTCCGGCACG
TTCGAGGGCC TGATTCCCCG GCTTGCCGAG CTGACCGACT CGCTGGACCG GCAGACCGGT
GACATCATCG CCGCGGCCGA GGGCCTGAAC AGGTTCGCCG GGATTCTGGC CGGCAGCAAG
GACAGCCTGG GCCGCACGCT CGACACGCTG CCCGAGGCGC TGGAGGTGCT CAACGACAAC
CGGGCGCAAC TCGTCGATGC GTTCACCGCG CTGCGCAGCT TCGCCGAGGT CGCATCGCGG
GTCCTGCAGG AGACCAAGGA CGACTTCGCC GCGGACTTCA AGGACCTGTT CCCGGTCATC
AAGGCGCTCA ACGACAACGC GGACTACTTC ATCAAGGACC TCGAGTTCCT GCCGACGTTC
CCGTTCCACT ACAAGTACCT GCGCAACGCG GTGCGCGGTG ACTACCTGAA CGTGTACACG
ACGTTCGACC TGACTTTGCG CCGCGTCGGT GAATCGGTGT TCACGACGTC GCTGGGACTG
GACCCGAACA TGAAGCGGAT GAACGAGATC GTCAATCCGC CCGACTTCCT CACCGGCGCG
ATGGCGAACC TGTCGGGTCA GGCGGCGGAT CCGTTCAAGA TTCCGCCGGG CACCGCGACG
CAACACGAGG GGGCGCCGTA A
 
Protein sequence
MIRRVLGVSS VALLLSGCQF GGLNSLNMPG TAGHGSGSFD VSVQLPDVST LPQNSPVMVD 
DVTVGSVSGV EAVQREDGTF FAEVQLSLDG NVKLPANATA KVAQTSLLGS QHIELAPPAD
GSGTGELVEG SRIPIDNTAN YPTTEQVLSS LGVVVNKGNL GALQDITDET YNAVVGRSGT
FEGLIPRLAE LTDSLDRQTG DIIAAAEGLN RFAGILAGSK DSLGRTLDTL PEALEVLNDN
RAQLVDAFTA LRSFAEVASR VLQETKDDFA ADFKDLFPVI KALNDNADYF IKDLEFLPTF
PFHYKYLRNA VRGDYLNVYT TFDLTLRRVG ESVFTTSLGL DPNMKRMNEI VNPPDFLTGA
MANLSGQAAD PFKIPPGTAT QHEGAP