Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1482 |
Symbol | |
ID | 4972808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 1544941 |
End bp | 1545732 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640455686 |
Product | short chain dehydrogenase |
Protein accession | YP_001132752 |
Protein GI | 145222074 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TTTCCCAAGC CCCGGCCGAG ATCGACGGCC ACGGTCTGCT GAAGGGCAAG GTCGTCCTGG TGACCGCCGC GGCAGGCACC GGAATCGGCT CCACCACCGC GCGCCGGGCA CTGCTCGAGG GTGCCGACGT CGTCGTCTCC GACTACCACG AGCGGCGCCT CGGGGAGACC CGCGACGAAC TCGCCGCGCT GGGGCTCGGC AAGGTCGACG CGGTGGTCTG CGATGTGACC TCGACCGAAG CCGTCGACGC GTTGATCACC TCCACGGTCG AGAAGGCCGG CCGGCTGGAC GTCCTGGTCA ACAACGCCGG GCTGGGCGGC CAGACTCCCG TCATCGACAT GACCGACGAC GAGTGGGACC GCGTCCTGAA CGTGACGCTG ACGTCGGTGA TGCGCGCAAC GCGCGCCGCG CTGCGGTACT TCCGCGACGC CCCCCACGGC GGCGTGATCG TCAACAACGC CAGCGTGCTG GGTTGGCGGG CACAGCACTC CCAGTCGCAC TACGCCGCCG CCAAGGCCGG CGTGATGGCG CTGACCCGGT GCAGCGCAAT CGAAGCCGTC GACTACGGGG TCCGGATCAA CGCGGTGTCG CCGAGTATCG CCCGGCACAA GTTCCTGGAG AAGACGAGTA GCTCCGAGCT GCTCGACCGT CTCGCCGAAG GTGAGGCGTT CGGCCGTGCC GCCGAACCGT GGGAGGTGGC GGCCACCATC GCGTTCCTGG CCAGCGACTA CTCCAGCTAT CTGACCGGCG AGGTCATCTC GGTGTCCAGT CAGCGGGCGT GA
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Protein sequence | MTDLSQAPAE IDGHGLLKGK VVLVTAAAGT GIGSTTARRA LLEGADVVVS DYHERRLGET RDELAALGLG KVDAVVCDVT STEAVDALIT STVEKAGRLD VLVNNAGLGG QTPVIDMTDD EWDRVLNVTL TSVMRATRAA LRYFRDAPHG GVIVNNASVL GWRAQHSQSH YAAAKAGVMA LTRCSAIEAV DYGVRINAVS PSIARHKFLE KTSSSELLDR LAEGEAFGRA AEPWEVAATI AFLASDYSSY LTGEVISVSS QRA
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