Gene Mflv_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1357 
Symbol 
ID4972683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1413985 
End bp1415088 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID640455559 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_001132627 
Protein GI145221949 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.823461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.108147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCA CTGCCGTCGA CGCGATCCCG TTCGCCATTC CGTACACCAA ACCCCTGAAG 
TTCGCCTCCG GCGAGGTGCA CACCGCCGAG CACGTACTGG TGCGGGTGCA CACCGACGAA
GGTGTGGTGG GTGTCGCCGA GGCGCCGCCG CGACCCTTCA CATACGGCGA GACCCAGGAC
GGCATCCTCG CGGTGATCCG CCAGATCTTC GCCCCGCAGA TCGTGGGCCT CACGCTCACC
GAACGCGAGG TGGTGAACGC GCGGCTGGCC CGCACCGTCG GCAACCCGAC CGCGAAAGCC
GCAGTGGACA TGGCGATCTG GGACGCGCTG GGTCGCAGCC TCGACCTGTC GGTCAGCGCG
CTGCTCGGCG GCTACGGCGA CCACATGCGT GTCAGCCACA TGCTCGGTTT CGACACCCCC
GACACGATGG TCGCCGAGGC CGAGCGCATC CGGGACGAGT ACGGGATCTC CACGTTCAAG
GTGAAGGTCG GCCGGCGCCC CGTCACGCTG GACACCGCGG TGGTGCGGGC CCTGCGGGAG
CGCTTCGGCG ACACCGTCGA GCTCTACGTC GACGGCAACC GCGGCTGGAC CGCGTCGGAA
TCGCTGCGCG CACTCAAGGA CATGGCTGAT CTCGACCTGT TGTTCGCCGA GGAGTTGTGC
CCCGCCGACG ACGTGCTGGG CCGGCGGTGG CTGGTCGAAC ACACCGAGAT CCCCTTCATC
GCCGACGAAT CCGTGCCGAC ACCGGCCGAT GTCACCCGCG AGGTGCTCGG CGGATCGGCC
ACCGCGATCA GCATCAAGAC CGCCCGCACC GGTTTCACCG GATCCCGGCG CGTCCACCAC
CTCGCCGAGG GGCTCGGCCT GGAGGTCGTG ATGGGCAACC AGATCGACGG CCAGCTCGGC
ACCGCCTGCG CGGTGGCGTT CGGCGCCGCG TTCGAGCTGA CGTCGAGGCG GGCCGGTGAG
CTGTCGAACT TCCTCGACAT GTCCGACGAC CTGCTCACCC ACCCGTTGCG CATCCGCGAC
GGACGACTGC ACGTGCCGCC GGGACCCGGC CTCGGAATCG AGATCGACCC GGACAAGCTC
GACCACTACC GCACCGATCA CTGA
 
Protein sequence
MKITAVDAIP FAIPYTKPLK FASGEVHTAE HVLVRVHTDE GVVGVAEAPP RPFTYGETQD 
GILAVIRQIF APQIVGLTLT EREVVNARLA RTVGNPTAKA AVDMAIWDAL GRSLDLSVSA
LLGGYGDHMR VSHMLGFDTP DTMVAEAERI RDEYGISTFK VKVGRRPVTL DTAVVRALRE
RFGDTVELYV DGNRGWTASE SLRALKDMAD LDLLFAEELC PADDVLGRRW LVEHTEIPFI
ADESVPTPAD VTREVLGGSA TAISIKTART GFTGSRRVHH LAEGLGLEVV MGNQIDGQLG
TACAVAFGAA FELTSRRAGE LSNFLDMSDD LLTHPLRIRD GRLHVPPGPG LGIEIDPDKL
DHYRTDH