Gene Mflv_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1350 
Symbol 
ID4972676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1405075 
End bp1405761 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID640455552 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_001132620 
Protein GI145221942 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.596228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGA CACGGACCGA GATGGCCGCG CGCGCGGCGC GTGAGCTGCG CGACGGTGAC 
TACGTCAACC TCGGAATCGG GCTGCCCACA CTGATTCCCG ACCATCTGCC GGAAGGCTCC
GACGTCACGT TGCACGCCGA GAACGGCATC CTGGGCGTCG GACCGTTCCC GTACGACGAC
GAGGTCGATC CCGATCTGGT CAACGCCGGC AAGCAGACCG TCTCGGTGGT CGCCGGGGCG
TCGTTCTTCG ACTCGGCGAC CAGCTTCGCG ATGATCCGCG GCGGGCACGT CGACGTCGCG
GTACTCGGCG GAATGCAGGT CGCCGTCAAC GGCGATCTGG CCAACTGGAT GGTGCCCGGC
TCGATGGTCA AGGGAATGGG CGGGGCCATG GACCTCGTCA ACGGTGCCGC CAAGGTGATC
GTGCTGATGG ATCACGTGTC GAAAAACGGT GCCGCCAAAC TCGTCTCGTC GTGCGATCTG
CCGCTGACCG GGAAGGCCGT CGTACAACGG GTCATCACCG ACCTCGGTGT CTTCGATGTG
ACCGGCACCG AGTTCGGCGT GGTGGAGCTC TCCCCCGGAG TCGACCTCGA CGAGGTGGCC
GCGAAGACCG GCGCGCCCGT CAGCGACCAC CGTCACCGTC TCAGCGCGGC CAGCTCCGAG
CGTGACCGGA TGCCGAGCTT GGCGTAG
 
Protein sequence
MSWTRTEMAA RAARELRDGD YVNLGIGLPT LIPDHLPEGS DVTLHAENGI LGVGPFPYDD 
EVDPDLVNAG KQTVSVVAGA SFFDSATSFA MIRGGHVDVA VLGGMQVAVN GDLANWMVPG
SMVKGMGGAM DLVNGAAKVI VLMDHVSKNG AAKLVSSCDL PLTGKAVVQR VITDLGVFDV
TGTEFGVVEL SPGVDLDEVA AKTGAPVSDH RHRLSAASSE RDRMPSLA