Gene Mflv_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1340 
Symbol 
ID4972666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1393973 
End bp1395085 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content71% 
IMG OID640455542 
Productputative transmembrane protein 
Protein accessionYP_001132610 
Protein GI145221932 
COG category[A] RNA processing and modification 
COG ID[COG5178] U5 snRNP spliceosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACG ACGCGGGCGG TTACGGCCCG GCAGGGTTCC CGCCGCCCCG GTACCCCCCG 
CCACCGGGGT ACGGTCCGCC ACCGGGATGG CAGCCGCCCG GGTACGGCGC GCCGGGCTAT
CCCCCGCCCT ACGGCGGCCC TCCGGTGCTC AAACCCGGCG TCGTCCCGCT GCGACCGCTG
ACGCTGTCCG ACATCTTCAA CGGCGCCGTC GCGTACGTCC GGGCGAATCC CAAAGCGACA
CTGGGCCTCA CCACCATCGT AGTCGTGGCC GCCCAGATCC TGTCGCTGGT GCTGTCGCTG
GTGCCCTTCA CGTTCACCGA CATGGTGGCC GACGGTCTCG GCGAGGACGA GGCCTCGGTC
CAGGTGATCG TGGGCTGGGT CGCGTCGAGC CTGGCCGGCG GCATCGCCAC CGCACTGGCG
GCCACGGTGC TGGCCGGGAT GCTGACGGTG GTGATCGGAC GGTCGGTGTT CGGTGCCGGC
ATCACCGTCG GCGAGGCCTG GAAGCGGCTG CGGCCGCGCT TCTGGCCGTT GATCGGGTTC
ACCGTGCTCA AGATGCTCGT CTTCCTGGTC GGCCTCGTCC TCGTGGTCGG GATCATCGGT
GCCACCGGCG CGCTGACCAC CGGGGTCGTC GCGTTCGCGG TCGCCATCCC GCTCGTCCTC
GCCGCAGTGC TGGCGGCGGT CTGGCTCTCG GTCATGCTGA CGTTCGCCCC GGTCATCATC
GTGCTGGAGC GGCGCGACAT CGTGACCGCG GTCAAGCGGT CGTTCACCCT GATCAAGGCG
GACTTCTGGC GGGTGTTCGG CATCTGGCTG CTCGCCGCGA TCGTGGCCCA GTTCATCGCC
GGCGCGGTCT CCATCCCGTT CACCCTCGGC GGACAGATCG CGTTCAGCGC GTCGGCGACG
ACGGCGTCGG CGATGCTGGC GTTCGCCCTG TTCGCGATCG GAGGCGCGAT CGGGCAGATC
ATCACCGGGC CGTTCACCGC CGGGGTGTCG GTGTTGCAGT ACGCCGACCG CCGGATCCGG
GCCGAGGCGT TCGACCTGGT GTTGCAGACG GGCGCGACGG CCGGCCCGTA CGCGCCGGCC
GACTCCACCG ACGACCTCTG GCTGACCCGC TGA
 
Protein sequence
MTYDAGGYGP AGFPPPRYPP PPGYGPPPGW QPPGYGAPGY PPPYGGPPVL KPGVVPLRPL 
TLSDIFNGAV AYVRANPKAT LGLTTIVVVA AQILSLVLSL VPFTFTDMVA DGLGEDEASV
QVIVGWVASS LAGGIATALA ATVLAGMLTV VIGRSVFGAG ITVGEAWKRL RPRFWPLIGF
TVLKMLVFLV GLVLVVGIIG ATGALTTGVV AFAVAIPLVL AAVLAAVWLS VMLTFAPVII
VLERRDIVTA VKRSFTLIKA DFWRVFGIWL LAAIVAQFIA GAVSIPFTLG GQIAFSASAT
TASAMLAFAL FAIGGAIGQI ITGPFTAGVS VLQYADRRIR AEAFDLVLQT GATAGPYAPA
DSTDDLWLTR