Gene Mflv_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1258 
Symbol 
ID4972584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1311589 
End bp1312335 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID640455458 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001132528 
Protein GI145221850 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000465819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGAGCC GTGTAGCGGT GGTGACCGGC GGGGCGTCGG GGCTGGGCGA GGCGATCTGT 
GCGGGCCTGG CCGCCGACGG GCACCGGGTG GCCGTGCTCG ACCTGGACGC GGACGCGGCG
AACAGGGTCG CGGCAAGCCT GCGCGGTAAC GGAGCGAGCG CGGTCGGTGT CGCGGTCGAC
GTGTCCGACG AGGACGCCGT CGTGCGCGCC TTCGACGCCG TACGAACCGA ATTCGGCCCC
GTCGAGATCC TGGTCACCAG CGCGGCGATC GGCGGTTTCA CCCGCTTCGA CAAGATCACC
CTCGACGAGT GGAACCGCTA CCTCGCGGTG AATCTGACGG GGACGTTCCT GAGCATTCGT
GCCGCGCTGT CGGACATGGT CGCCGCGCAA TGGGGGCGCG TCGTGACGAT CTCGTCCGCA
GCGGGCCAGC AGGGCGCACC ACGCCAGGGC CACTACTCGG CGACCAAGGG CGGCGTGATC
GCGATGACCA AGACCGTGGC GCGTGACTAT GCACGCCACG GCATCACCGC GAACTCCTTG
CCGCCCTTCG CGATCGAGAC CCCGATGCTG CGCAGACAGC AGTCAGAGGG GAAACTGCCG
CCGGACGAGT TTCTGACCCA GGCCATACCG GCGGGCCGCG TGGGCGCCCC GTCCGATGTC
GCCGCAGTGT GCTCGTTCCT GTGCTCGGAC GCCGCCGGAT ACGTGACGGG TCAGGTCATC
GGTGTGAACG GCGGTGCGGT GCTGTGA
 
Protein sequence
MVSRVAVVTG GASGLGEAIC AGLAADGHRV AVLDLDADAA NRVAASLRGN GASAVGVAVD 
VSDEDAVVRA FDAVRTEFGP VEILVTSAAI GGFTRFDKIT LDEWNRYLAV NLTGTFLSIR
AALSDMVAAQ WGRVVTISSA AGQQGAPRQG HYSATKGGVI AMTKTVARDY ARHGITANSL
PPFAIETPML RRQQSEGKLP PDEFLTQAIP AGRVGAPSDV AAVCSFLCSD AAGYVTGQVI
GVNGGAVL