| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1253 |
|---|
| Symbol | |
|---|
| ID | 4972579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 1306153 |
|---|
| End bp | 1306755 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640455453 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001132523 |
|---|
| Protein GI | 145221845 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000989157 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAAGT CGAGGACACC CGAGCGCGGA CGTAAAGGGG AGCAGACGCG CGAGCGCCTC
CTGGGCGCGG CGATCGCGGA GTTCAAGCGC GACGGTATGG CCGCTGCCGA CATCGGTGCG
ATCGTGTCGG CAGCCGGAGT CGCGCACGGC ACCTTCTTCT TCCACTTTCC GACCAAAGAG
CACGTGCTGG TCGAGTTGGA GAATCGCGAG CAGGAGCGGA TGGCCGCCGA GTTGACGCGG
TTCTACCGGC GTCCCCACGA CGTTCGGGCG ACGCTGACCA AAGCGGTCAC GGTTCTCGAA
GCTCTCGAAC GGCGGCTGGG CAGCCGGTTG TTCAAAGACT TCCTCGCGCT GCACTTCTCG
ACCAGGCGGC CACCCTCCGA AGAGTGGTCG GCGCATCCGG TGATCGTCGC CGTCGTCGAG
GACCTGGAGC GGGCACGGGA CCGCGGGGAG ATCCCCGCCG ACGTCGACGT GATGCTGCGC
GGGGTGTCGT TCCTGGTGGG GCTGTACGCG CTGCTGATCA CGATGCCGGA GTCCCGAGAA
ATTCGCGCAC CGGTCATCGA CGAATACGTC ACGACCTATA TGGACGCCCT GCACGCGGCG
TGA
|
|---|
| Protein sequence | MLKSRTPERG RKGEQTRERL LGAAIAEFKR DGMAAADIGA IVSAAGVAHG TFFFHFPTKE
HVLVELENRE QERMAAELTR FYRRPHDVRA TLTKAVTVLE ALERRLGSRL FKDFLALHFS
TRRPPSEEWS AHPVIVAVVE DLERARDRGE IPADVDVMLR GVSFLVGLYA LLITMPESRE
IRAPVIDEYV TTYMDALHAA
|
|---|
| |