Gene Mflv_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1219 
Symbol 
ID4972545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1274929 
End bp1276911 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content67% 
IMG OID640455419 
ProductPTS system, mannitol-specific IIC subunit 
Protein accessionYP_001132489 
Protein GI145221811 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAA CGACTGTCGA CGACGCGCCG GCGCGCACCG GCGTGCGGGT GAGGGTCCAG 
AAGCTGGGCA CCGCACTGTC CAACATGGTC ATGCCCAACA TCGCGGCGTT CATCGCCTGG
GGCCTGATCA CGGCACTGTT CATCGAGCAG GGCTGGTTGC AGGGGATCTT CGCCGGCCTG
AAGGACCCCG ACGGCTGGGT CGCCAAGATC GGCGGCTGGG GCGCCTACGA CGGCGCCGGG
ATCGTCGGCC CGATGATCAC CTTCCTGCTC CCGATCCTGA TCGGCTACAC CGGCGGTCGG
ATGATCCACG GCAACCGTGG TGCGGTCGTC GGTGCGATCG CCACCGTCGG CGTGGTCACC
GGTGCCGACG TGCCGATGTT CCTCGGCGCG ATGATCATGG GCCCGCTGGG CGGCTGGTGC
ATGAAGAAGA TCGACGCCAT CTGGGACGGC AAGATCCGTC CCGGCTTCGA GATGCTCGTC
GACAATTTCT CCGCCGGCAT CCTCGGCATG ATCCTGGCGG TCTTCGGATT CTTCGGCATC
GGTCCCATCG TGTCGGCATT CACCCGCGGC GCGGGCAACG CGGTGGACTT CCTCGTCGAC
AACGACCTGC TGCCGCTGAC CTCGATCCTG ATCGAGCCGG CGAAGGTGCT GTTCCTCAAC
AACGCGATCA ACCACGGTGT GCTGACCCCG CTGGGCACCA CGCAGGCGCT GGAGACCGGC
AAGTCGATCC TGTTCCTGCT GGAGACCAAC CCCGGCCCGG GACTCGGAAT CCTGTTGGCG
TTCACCGTCT TCGGTAAGGG GGTGGCCCGG GCGTCGGCTC CCGGCGCCGC GATCATCCAG
TTCTTCGGCG GCATCCACGA GATCTACTTC CCGTATGTGC TGATGAAGCC GAAGCTGATC
ATCGCCACCA TCCTCGGCGG CATGACCGGC GTGTTCATCA ACGTGCTGTT CGGCTCGGGT
CTGCGGGCCC CGGCGGCGCC CGGATCGATC ATCGCGATCT ATGCGCAGAC GGCCAGCGGA
AGCTTCCTCG GCGTGACGCT GTCGGTGCTC GGCGCGGCGA CGGTCTCGTT CGTCGTCGCG
GCGTTCCTGC TCAAGACCGA CAAGGCCGAC GACGAACAGG ATCTCGCCGC GGCCACCGCG
TCGATGGAGT CGATGAAGGG CAAGAAGTCC AGCGTCTCGT CCCAGCTGGT CGGCGCCTCC
AGCGGCGGGC CGCGTGGACC CATCAAGAGC ATCGTGTTCG CCTGCGACGC GGGCATGGGG
TCCTCGGCGA TGGGAGCGTC GGTGCTGCGC AGGAAGATTC AGCAAGCGGG ATTCGGCGAT
GTCAAGGTCA CCAACTCGGC CATCTCGAAT CTGACCGATA GTTACGACCT GGTGGTCTCC
CATCGCGACC TGACCGCGCG GGCCGGCCAG CGCACGGCCT CTGCGATCCA CGTCTCGGTC
GACGACTTCA TGAGCAGCCC GCGCTACGAC GAGATCGTCG AGCAGCTCAA GCAGGGCAAT
GGCGGCGGAT CCGAGGCCGA GCCCATGGTC GAGGACGGGT CCGCCGGATC CTCCGACGGC
GACGTGCTCG CGCTGTCGTC CATCGTGCTG AACGGATCGG CGTCCTCGGC GGCCGACGCG
ATCAGCGAAG CGGGCCGGCT GCTGGTGGAC GCGGGCGCTG TCGAGCCGTC CTACGTCGAC
GCGATGCACG AGCGGGAGAG CTCGGTGTCG ACCTACATGG GCAACGGGTT GGCGATCCCG
CACGGCACCA ACGAGGCCAA GGGCGCGATC CGCCGCACCG GGTTGTCGCT CGTGCGCTAC
CCCGAACCGA TCGACTGGAA CGGCAAGCCC GCCGAGTTCG TGGTCGGCAT CGCCGGCGCG
GGCAAGGACC ACATGGCCCT GTTGAGCAAG ATCGCGCAGG TGTTCTCCAA GCCCGACGAG
GTCGCCCGGC TGCGCGCCGC GCAGACCCCG GAGGAGATCA GGTCGATCCT GATGGGTTCG
TGA
 
Protein sequence
MSQTTVDDAP ARTGVRVRVQ KLGTALSNMV MPNIAAFIAW GLITALFIEQ GWLQGIFAGL 
KDPDGWVAKI GGWGAYDGAG IVGPMITFLL PILIGYTGGR MIHGNRGAVV GAIATVGVVT
GADVPMFLGA MIMGPLGGWC MKKIDAIWDG KIRPGFEMLV DNFSAGILGM ILAVFGFFGI
GPIVSAFTRG AGNAVDFLVD NDLLPLTSIL IEPAKVLFLN NAINHGVLTP LGTTQALETG
KSILFLLETN PGPGLGILLA FTVFGKGVAR ASAPGAAIIQ FFGGIHEIYF PYVLMKPKLI
IATILGGMTG VFINVLFGSG LRAPAAPGSI IAIYAQTASG SFLGVTLSVL GAATVSFVVA
AFLLKTDKAD DEQDLAAATA SMESMKGKKS SVSSQLVGAS SGGPRGPIKS IVFACDAGMG
SSAMGASVLR RKIQQAGFGD VKVTNSAISN LTDSYDLVVS HRDLTARAGQ RTASAIHVSV
DDFMSSPRYD EIVEQLKQGN GGGSEAEPMV EDGSAGSSDG DVLALSSIVL NGSASSAADA
ISEAGRLLVD AGAVEPSYVD AMHERESSVS TYMGNGLAIP HGTNEAKGAI RRTGLSLVRY
PEPIDWNGKP AEFVVGIAGA GKDHMALLSK IAQVFSKPDE VARLRAAQTP EEIRSILMGS