Gene Mflv_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1191 
Symbol 
ID4972518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1249092 
End bp1249922 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID640455388 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001132461 
Protein GI145221783 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.320019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAACAC CCTCGGTGTT CGAGGCGACA CGGCCGCAGC TGACAGCCAT GGCCTTCAGA 
ATGCTCGGCT CGATTCACGA CGCGGAAGAC GCAGTGCAGA GCGCCTGGAT CAAAGCCTCC
ATCACGGCCA CCGACGATCT GCGAAACCCC GCCGCCTACC TGACCACCGT CCTCACCCGC
GAATGTGTCG ACCAGCTGCG CATGCGGCAG CGCCGTCGGG AAGAACCGCT GGCGGCAGAC
ATGATCCCGG CGGACACCGT CGCGGCAGAC GAGCACTACC TACGGCGCGA GAGCATCTCC
CGGGCCCTGA TGGTGGTGCT CGACCGGCTG ACGCCCTCTC AACGGGTCGC CTACGTTCTG
CACGACGTGT TCGCCGTGCC GTTCCAGGAG ATCGCCGAAA CCCTCGGGAC GAGTCCGGCC
AGTGCGAAAA AGCACGCCAG CCGCGCACGA GAACGGATCC ACCGCACTGT GCAGATCCCC
GCCGCAGCCA CCATCGACAG CGCGGTCGTC GAGGCATTTC TCGCAGCGGC GGCCGGTGGC
GACACGGCCA CCATGGTGGC GCTGATGGCG GACGACTGCG TACGAGTCGC CGACCCCACG
CTCCTGCCCG CACACACGCC GGCCGTCGTC ATCGGCGACT CTGCTGTCGC CGACGAGACC
TCGCTGTTCA TCGACCGAAT CCGTGTCAGC GCACCGATGC TCGTCGACGG ACGTACCGTC
CATGTCATCG CCCCGGGCGG TCACGAGCTC GCAGTCATCG ACATCACCGT CACCGACGGG
CGTATCGCCC GCATCGAGAT CACCCGAACC CACCCGAGCG GCCGGCGCTG A
 
Protein sequence
MITPSVFEAT RPQLTAMAFR MLGSIHDAED AVQSAWIKAS ITATDDLRNP AAYLTTVLTR 
ECVDQLRMRQ RRREEPLAAD MIPADTVAAD EHYLRRESIS RALMVVLDRL TPSQRVAYVL
HDVFAVPFQE IAETLGTSPA SAKKHASRAR ERIHRTVQIP AAATIDSAVV EAFLAAAAGG
DTATMVALMA DDCVRVADPT LLPAHTPAVV IGDSAVADET SLFIDRIRVS APMLVDGRTV
HVIAPGGHEL AVIDITVTDG RIARIEITRT HPSGRR