Gene Mflv_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1184 
Symbol 
ID4972510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1242754 
End bp1243584 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID640455380 
ProductABC-2 type transporter 
Protein accessionYP_001132454 
Protein GI145221776 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.865506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA TGGATGCGGC CGCCCGGTCC CGCACGTTCG GGCGGGCGTG GGGCGATCTG 
GTCGCCGGCT TCGGCAAGCG CGAACTCTGG CTGCACCTGG GTTGGCAGGA CATCAAGCAG
CGCTACCGCC GCTCGGTGCT CGGACCGTTC TGGATCACCA TCGCCACCGG CACCACCGCC
GTCGCGATGG GCGGACTGTA CTCGATGCTG TTCAAACTCG AACTGTCCGA GCATCTTCCG
TACGTGACGC TCGGCTTGAT CGTGTGGAAT TTGATCAACG CGTCGATCCT CGAAGGCGCC
GACGTCTTCG TCGCCAACGA GGGCCTGATC AAACAGCTGC CGACGCCGCT GTCTGTGCAC
GTCTACCGGC TGGTGTGGCG GCAGATGCTG TTGTTCGCCC ACAACATCAT CATTTTCGTG
ATCATCGCGA TCATCTATCC GAAGCCGTGG TCGTGGGCCG ACCTGTCCGT GATTCCGGCG
CTGCTGTTGC TCGCGCTGAA CTGCGTCTGG GTGGCACTGT GTTTCGGCAT TCTGGCGACC
CGCTACCGCG ACATCAGCCC GCTGCTGGGC AGCCTGGTGC AGCTGCTGTT CTTCATGACG
CCGATCATCT GGAACGAGTC GACACTGCAG GCCCAGGGCG CGGGCGGGTG GGCCAAGATC
GTCGAACTCA ACCCGCTGCT GCATTACCTC GACATCGTGC GTGCACCGCT GCTGGGCGCC
GAGCAGGAGC TGCGGCACTG GGTGGTGGTG CTGGTGCTCA CCGTCGTCGG GTGGGGTTTC
GCGGCACTGG CGATGCGCCA GTACCGGGCC CGGGTCGCGT ACTGGGTCTG A
 
Protein sequence
MTIMDAAARS RTFGRAWGDL VAGFGKRELW LHLGWQDIKQ RYRRSVLGPF WITIATGTTA 
VAMGGLYSML FKLELSEHLP YVTLGLIVWN LINASILEGA DVFVANEGLI KQLPTPLSVH
VYRLVWRQML LFAHNIIIFV IIAIIYPKPW SWADLSVIPA LLLLALNCVW VALCFGILAT
RYRDISPLLG SLVQLLFFMT PIIWNESTLQ AQGAGGWAKI VELNPLLHYL DIVRAPLLGA
EQELRHWVVV LVLTVVGWGF AALAMRQYRA RVAYWV