Gene Mflv_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1168 
Symbol 
ID4972494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1213023 
End bp1214912 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content68% 
IMG OID640455364 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001132438 
Protein GI145221760 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCC ACAACCCGTT CCTCAAGGAC GGCTTGATCA AGTTCCCCGA CAACGGAAAC 
TTGGTCCGTC ACGTCGAACG GTGGGCCAAG GTGCGCGGAG ACAAGATGGC CTACCGGTTC
ATCGACTTCT CCACCGAGCG CGACGGCGTG GAACGTGACC TGCACTGGGC GGACTTCAGC
ACCCGCAACA AGGCCGTCGG CGCCCGTCTG CAGCAGGTGA CCGAGCCCGG TGACCGGGTC
GCGATCCTGT GCCCGCAGAA CCTGGACTAC CTCGTCGCGT TCTTCGGCAC CCTGTACTCC
GGCCGCATCG CGGTCCCGCT GTTCGACCCG AACGAACCCG GCCATGTCGG ACGCCTGCAT
GCGGTCCTCG ACGACTGCAC CCCGTCGGCG ATCCTGACCA CGACCGCCGC CGCCGAGGGT
GTGCGCAAGT TCTTCCGGAC CCGGCCCGCC AAGGACCGTC CGCGCGTCAT CGCGGTCGAC
GCCGTGCCCG ACGAGGTCGG CGCCACCTGG GAACCGGTCG ACGTGCAGCA CGACACGATC
GCCTACCTGC AGTACACCTC GGGCTCGACC CGCATCCCCA CCGGCGTGCA GATCACCCAC
CTCAACCTCG CCACCAACGT GGTCCAGGTG ATCGAGGCGC TCGACGCCGA AGAGGGCGAC
CGCGGGGTGT CCTGGCTGCC GTTCTTCCAC GACATGGGTT TGATCACGGT GCTGTTGTCG
CCGATGCTCG GCCACCACAT CTCGTTCATG ACGCCGGCGG CGTTCGTCCG CAGGCCGGGT
CGCTGGATCC GGGCGATGGC GCGCAAGCCC GACGACACCG GCGGTGTCAT CTCGGTGGCC
CCGAACTTCG CGTTCGACCA CGCCGCCGCG CGTGCGCTGC CCAAGGACGA CGAGCCGCCG
CTGGACCTGT CCAACATCAA GTGCATCCTC AACGGCAGCG AGCCGATCTC GGCCGCGACT
GTGCGCCGGT TCAACGAGGC GTTCAGCCCC TACGGTTTCA AGCCCGAGGC GATCAAGCCG
TCCTACGGTC TGGCCGAGGC GACGCTGTTC GTGTCGACGC CCCCGATCCA CGAGCATCCG
AAGATCATCT CGGTGGACCG CGACGAGCTG AACAGCCACC GGTTCGTGCA GGTGCCCGAC
GACTCGCCGA AGGCCGTCGC CCAGGCGGGC GCCGGCCAGA TCGGCATCGC GGAGTGGGCG
GTGATCGTCG ACAACGACAC CGCGACCGAA CTGCCTGACG GGCAGATCGG TGAGATCTGG
ATCAGCGGTC AGAACATGGG CACCGGGTAC TGGAACAAGC CCGAGGAGAC CATCGCGACC
TTCCAGAACC TGCTCAAGTC GCGGACCACG CCGTCACACG CCGAGGGCGC CGACGCGGAC
GCGACGTGGG TACGCACCGG TGACCTCGGC GCGTACCACG ACGGCGAGCT GTTCATCACC
GGGCGCGTCA AGGATCTGGT GATCATCGAC GGCCGCAACC ACTATCCGCA GGACCTGGAG
TACTCCGCGC AGGAGGCCAC CAAGGCGCTG CGCACCGGCT TCGTCGCCGC GTTCTCGGTG
CCTGCCAACC AATTGCCTGA CGAGGTGTTC GACAACGCGC ACGCCGGAAT CAAGCGCGAC
CCCGACGACA GCTCCGAACA GCTGGTCATC GTCGGCGAGC GCGCACCGGG CGCGCACAAG
CTCGACATGG GTCCGATCAT CGACGACATC CGCGCCGCGA TCGCGGTCCG CCACGGTGTG
ACGGTGCGCG ACGTGCTGCT CACGCCGGCC GGCGCGATCC CGCGCACCTC CAGCGGCAAG
ATCGGCAGGC GCGCCTGCCG GTCGGCGTAC CTGGACGGCA GCCTGCGTAG CGGCAAGGTG
GCCAACGCGT TCCCGGATGA AGTGGACTGA
 
Protein sequence
MAFHNPFLKD GLIKFPDNGN LVRHVERWAK VRGDKMAYRF IDFSTERDGV ERDLHWADFS 
TRNKAVGARL QQVTEPGDRV AILCPQNLDY LVAFFGTLYS GRIAVPLFDP NEPGHVGRLH
AVLDDCTPSA ILTTTAAAEG VRKFFRTRPA KDRPRVIAVD AVPDEVGATW EPVDVQHDTI
AYLQYTSGST RIPTGVQITH LNLATNVVQV IEALDAEEGD RGVSWLPFFH DMGLITVLLS
PMLGHHISFM TPAAFVRRPG RWIRAMARKP DDTGGVISVA PNFAFDHAAA RALPKDDEPP
LDLSNIKCIL NGSEPISAAT VRRFNEAFSP YGFKPEAIKP SYGLAEATLF VSTPPIHEHP
KIISVDRDEL NSHRFVQVPD DSPKAVAQAG AGQIGIAEWA VIVDNDTATE LPDGQIGEIW
ISGQNMGTGY WNKPEETIAT FQNLLKSRTT PSHAEGADAD ATWVRTGDLG AYHDGELFIT
GRVKDLVIID GRNHYPQDLE YSAQEATKAL RTGFVAAFSV PANQLPDEVF DNAHAGIKRD
PDDSSEQLVI VGERAPGAHK LDMGPIIDDI RAAIAVRHGV TVRDVLLTPA GAIPRTSSGK
IGRRACRSAY LDGSLRSGKV ANAFPDEVD