Gene Mflv_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1083 
Symbol 
ID4972409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1128757 
End bp1129800 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content72% 
IMG OID640455279 
ProductABC transporter related 
Protein accessionYP_001132353 
Protein GI145221675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.757107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC GGGGTGTCGG TGTGCAGTTC GACGAGCTGA CCCGGGTGTA CGGCGCGACG 
CGGGCCCTGG ACGGGTTGAC GCTGCACATC GAGCCGGGGG AGCTGGTCGC GCTGCTCGGC
CCGTCGGGCG GCGGGAAGAC CACCGCGCTG CGCATCCTGG CCGGCCTGGA CGAGGCCACC
TCGGGCACCG TGTCGGTCGG CGGCGTCGAC GTCGGCAGGG TGCCCGCCAA CAAGCGCGAC
ATGGGCATGG TGTTCCAGGC GTACAGCCTG TTCCCGCACC TGACCGTGCT CGACAACGTC
GCGTTCGGCT TGAAGATGCG CGGGAAAGGC AAGAGCGACA GGCTGTCTCG GGCCGCCGAC
ATGCTCGACC TGGTCGGCCT GGGCGAACTC GGCGGCCGGT ACGCCAACGA GCTCTCGGGT
GGTCAGCAGC AGCGCGTGGC CCTGGCGCGC GCGCTGGCGA TCCGGCCGCG GGTGCTTCTG
CTCGACGAAC CGCTGTCGGC ACTGGATGCC AAGGTGCGCA CCCAGTTACG TGACGAGATC
CGGCGGGTGC AGCTGGAGGT CGGCACCACG ACGCTGTTCG TCACCCACGA CCAGGAGGAG
GCGCTGGCCG TCGCCGACCG GGTCGGCGTG ATGAACCAGG GCAGGCTCGA ACAGCTCGCC
GCACCCGCCG ACCTCTACGC CCACCCGGCG ACTCCGTTCG TCGCGGACTT CGTGGGCCTG
AACAACAAAG TGCCCGCGTC CGTTTCGGGC GGCACGGCAA CCCTGCTCGG CGTCTCGGTG
CCCGCGCTGC CCGGATCGGT CGACGGTGAC GGCGTGGCGA TGGTGCGCCC GGAAGCGGTC
ACCGTGGCCG CGGATCCGGC CGGGACGGCG ACGGTCGCCA CCGTGTCGTT CCTCGGTGCG
ATCACCCGGG TCGGCATCAC GATGCCCGAC GGGTCGCTGC TCAGCGCCCA GATGTCGAGC
ACCGCGGCGC GCGCCCTCAC CCCCGGTGAC CCGGTGACCG TCGGGGTCGA ACCGGGCGGG
GTGCTCGTCA CCCGCCCCCT CTAG
 
Protein sequence
MTNRGVGVQF DELTRVYGAT RALDGLTLHI EPGELVALLG PSGGGKTTAL RILAGLDEAT 
SGTVSVGGVD VGRVPANKRD MGMVFQAYSL FPHLTVLDNV AFGLKMRGKG KSDRLSRAAD
MLDLVGLGEL GGRYANELSG GQQQRVALAR ALAIRPRVLL LDEPLSALDA KVRTQLRDEI
RRVQLEVGTT TLFVTHDQEE ALAVADRVGV MNQGRLEQLA APADLYAHPA TPFVADFVGL
NNKVPASVSG GTATLLGVSV PALPGSVDGD GVAMVRPEAV TVAADPAGTA TVATVSFLGA
ITRVGITMPD GSLLSAQMSS TAARALTPGD PVTVGVEPGG VLVTRPL