Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1071 |
Symbol | |
ID | 4972397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 1117697 |
End bp | 1118536 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640455267 |
Product | rhomboid family protein |
Protein accession | YP_001132341 |
Protein GI | 145221663 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.254711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTCCC CGTATCCGTA CCCGGCCCAG CAGATACCGA CCTGCTACCG GCATCCCGAC CGGCAGACCT ACGTCCGGTG CACCCGCTGC AATCGCTTCA TCTGTCCCGA GTGCATGCGC GACGCGGCCG TCGGGCACCA GTGCATCGAC TGCGTCGGCG AGGGGATGCG CTCGGTGCGG CCCGTGAAGA CGCTGACCCC GGTGGTGACC TACGCGCTGA TCGGCATCAA CCTGCTGGCG TTCGCCCTGC AGATGGCCTC GCCGGGACTG CAACGGGCCT TCGGGTTGTG GTCACCCGCG GTCGCCGACG GCGAGATGTA CCGGCTGCTG ACGTCGGCGT TCCTGCATTT CGGCCTCACC CATCTGGCGT TCAACATGCT GGCCCTGTAT TTCGTGGGGC CACCGCTGGA GGCCGCCCTG GGACGGGCGC GGTTCATCAC GCTCTACCTC GTCAGCGCAC TCGGTGGATC GGTGCTGGTG TACCTGCTGA CGCTCAACGC GCTCACCGCG GGCGCGTCAG GCGCGGTGTT CGGCTTGTTC GGCGCGACGT TCGTGGTGGG CAGGAAGCTC AACATGGATG TGCGCAGCGT GATGGCGATC ATCGTGCTGA ACCTGGCCTT CACGTTCCTC ATCCCGCTGT TCACCTCGCA GAACATCAGC TGGCAGGGCC ACATCGGAGG ACTTGTCACC GGAGCCCTCG TCGCCGCGGC GTTCGCGTAC GCGCCCCGCG CGCAACGCAC CCTGATCCAG GCCGGGGCGG TGGGCGCGAT CCTCGTCGTC TTCGTCGGGC TGATCGTGTG GCGCACGGCG GAACTGCGGA CCCTGATGGG GCTGGGCTGA
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Protein sequence | MSSPYPYPAQ QIPTCYRHPD RQTYVRCTRC NRFICPECMR DAAVGHQCID CVGEGMRSVR PVKTLTPVVT YALIGINLLA FALQMASPGL QRAFGLWSPA VADGEMYRLL TSAFLHFGLT HLAFNMLALY FVGPPLEAAL GRARFITLYL VSALGGSVLV YLLTLNALTA GASGAVFGLF GATFVVGRKL NMDVRSVMAI IVLNLAFTFL IPLFTSQNIS WQGHIGGLVT GALVAAAFAY APRAQRTLIQ AGAVGAILVV FVGLIVWRTA ELRTLMGLG
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