| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1046 |
|---|
| Symbol | |
|---|
| ID | 4972373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 1090449 |
|---|
| End bp | 1091645 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640455243 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001132317 |
|---|
| Protein GI | 145221639 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA CCCTCGAACT TGCCTCCGCC ACGCACGTCG CCAGTGCCGC AGCGTGGATC
GCCGGCGCCG TCGCCATCGC CTACGCCGTC GGCCTGGCCA TCTCGTGGCT CCTGCAGCGG
TTGGGCCGGC GCAGCACGCT GCTGCACCAC GCCGCGGAGC TGACCCGCAT GCCGCTGCGC
GCCACGCTGG TGGTGATCGC CGCGTCTGCC GCGGTGCGCC GCACCGTCGA CGCGGACACC
GGTTGGCGGG GCTTCGTCGA CCACCTGCTG GTCATCACGC TGATCGCCAC CATCACCTGG
ACGATCGCGA GCCTGGTGCG CGTTGCCGAA CGCCAGGCCA TCTCCCGCTT CGCCGGCGGC
GACGAGGGTC TGACCGACGC CGACCGGCAC CGGCGCAAGA TCAAGACGCA GGTGCTCACC
CTGAGGCGGA TCGCGGTGGC CATCATCGTG ATGCTCGGTG CCGCGGCCGC GTTGATGACG
TTCCCGGCGT TCAGCGACAT CGGCAAGACG GTGTTCGCGT CTGCGGGCGT GTTGACCGTC
GTGGCCGGCC TCGCCGCCCA GACGTCGCTC GGATCGGTGT TCGCCGGCAT CCAGATCGCG
TTCTCCGATG CGATCCGCGT CGGGGACGTC GTGGTACTCG AAGAGGAGTG GGGCCGGATC
GAGGAGATCA CCCTGACCTA TGTGGTCGTA CACCTGTGGG ACGAGCGTCG CCTGGTCCTG
CCGTGTACGT ACTTCACCAG CACCCCGTTC CAGAATTGGA CGCGCAACGC GACCGAACTG
CTGGGCACCG CGGAGCTCGA CGTCGACTTC ACCGTGCCGT TCGACCAGAT GCGGGCGGAG
CTGGATCGCC TGCTGCGCGC GAATCCGTTG TGGGACGGAC GCGTCGGCGT CCTGCAGGTG
ACCGACGCGG TGGAGGGCCG GGTCCGGGTG CGCATGCTGG TCAGTGCCTC CAACGCGGGC
CAGTTGTTCG ATCTGCGCTG CGATGTTCGC GAAGGGATGG TCGCGTGGTT GCAGCGCACC
AATCCCGGGG CGATGCCCCG TACACGGATC GAGCATCGGA CCGACGCCGA CACAGCGCGC
GGCGATGCCG CCGTGCCGGT GCCCGGACGT TCTCAGGCGG ACTCCGGTCT GTTCAGTGGC
AGCATCGCCG CCGATCGCCG CAATCGTGAT CTGACCTGGG CACATGACGC CCGCTGA
|
|---|
| Protein sequence | MDDTLELASA THVASAAAWI AGAVAIAYAV GLAISWLLQR LGRRSTLLHH AAELTRMPLR
ATLVVIAASA AVRRTVDADT GWRGFVDHLL VITLIATITW TIASLVRVAE RQAISRFAGG
DEGLTDADRH RRKIKTQVLT LRRIAVAIIV MLGAAAALMT FPAFSDIGKT VFASAGVLTV
VAGLAAQTSL GSVFAGIQIA FSDAIRVGDV VVLEEEWGRI EEITLTYVVV HLWDERRLVL
PCTYFTSTPF QNWTRNATEL LGTAELDVDF TVPFDQMRAE LDRLLRANPL WDGRVGVLQV
TDAVEGRVRV RMLVSASNAG QLFDLRCDVR EGMVAWLQRT NPGAMPRTRI EHRTDADTAR
GDAAVPVPGR SQADSGLFSG SIAADRRNRD LTWAHDAR
|
|---|
| |