Gene Mflv_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1019 
Symbol 
ID4972346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1066819 
End bp1069332 
Gene Length2514 bp 
Protein Length837 aa 
Translation table11 
GC content69% 
IMG OID640455216 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001132290 
Protein GI145221612 
COG category[L] Replication, recombination and repair 
COG ID[COG4581] Superfamily II RNA helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC CCCTGATCGC CGACCCCGGC GACGACCCTG ACGACGTGTT CGCCGCCTTC 
GGGGCGTGGG CGCAGGAGAA CGGCACCACG CTGTACCCGG CCCAGGAGGA GGCGCTGATC
GAGCTGGTCA GCGGCTCCAA CGTCATCCTC GCCACCCCGA CCGGCTCCGG TAAGTCGCTG
GTCGCCACCG GTGCGATCTA CGCCCAGCTC GCCGCCGGGG GCGTGAGTTT CTACACCGCG
CCGATCAAGG CGCTGGTCAG CGAGAAGTTC TTCGCGCTGT GCGAGGTGTT CGGTGCGGTC
AACGTCGGAA TGCTCACCGG CGACGCGTCG GTCAACGCGG ATGCGCCGAT CATCGCGTGC
ACCGCGGAGA TCCTGGCCAA CGTCGCGCTG CGGGAGGGCC GGGACGCAGA CATCGGATTG
TGCGTGATGG ACGAGTTCCA CTTCTACGGC GACCCCGACC GCGGCTGGGC GTGGCAGGTG
CCGCTGCTGG AACTGCCGCA GGCCCAGTTC CTGTTGATGT CGGCCACGCT CGGAGACGTC
ACCTTCCTGC GCGAGGACCT GACCCGGCGC ACCGGCCGCC CGACGGCGCT GGTGGCCAAC
GCCGAGCGGC CGGTGCCGCT GTACTTCTCC TACGCGACGA CGCCGATGCA CGAGACCATC
CAGGAGCTGA TCGACACCCG ACAGTCGCCG GTCTACGTCG TGCACTTCAC CCAGGCCTCG
GCGCTGGAGC GGGCGCAGGC GCTGATGAGC GTCAACGTCA GCAGCAAGGC GGAGAAGGCG
GCGATCGCCG AGCACATCGG CGCGTTCCGT TTCTCGTCGG CGTTCGGGTC GACGCTGTCG
CGTCTGGTCC GGCACGGCAT CGGGGTGCAC CACGCCGGGA TGCTGCCCAA GTACCGCAGG
CTGGTCGAAC AGCTGGCCCA GGCCGGCCTG CTCAAGGTCA TCTGCGGCAC CGACACGCTC
GGGGTCGGCA TCAACGTTCC GATCCGCACC GTGGTGTTCT CGGCGCTGTC GAAATACGAC
GGCACCCGCA CCCGGCTGCT CAACGCCCGC GAGTTCCACC AGATCGCCGG GCGCGCGGGG
CGCGCCGGCT TCGACACCGC CGGCACCGTC GTCGTGCAGG CCCCCGACCA CGAGGTGGAG
AACCTCAAGC AGTTCGCCAA GGTCGCCGAC GATCCGAAGA AACGCCGGAA GCTGGTGCGG
CGCAAGGTCC CCGAGGGCAT GGTGCCGTGG AGCGAAGCCA CGCTGACCAA ACTGGTCGAC
GCTGTCCCGG AACCTCTCAC GAGTCACATG CGGGTCACCA CGGCGATGAT CCTCGATGTC
GTCGACCGTC CCGGGGATCC GTTCGCGGCG ATGCGGCGGC TGCTGACCGA CAACCACGAG
CCGCGCAAGA GGCAGCTGCG GTTGATCCGC GAGGCGGTCG GTATCGCGCG GTCGCTGCTG
CAGGCGGGGG TCTTGGAGCG GGTGGGCGAA ATTGGCGCAC CGGCCGACGG CAGGCGCTAC
CGCTTGACCG TGGACCTGCC GCGCGACTTC GCCCTGAACC AGCCGCTGTC GACGTTCGCG
CTGGCCGCCA TCGGCCTGCT CGACGCGGAG TCGGATCAGT ATGCGCTCGA CATCGTCTCG
GTCATCGAGG CGACGCTGGA GGACCCCCGC CAGATCCTGG CCGCGCAGCT GAACCGGGCC
CGGGGCGAGG CCGTCGCGCA GATGAAGGCC GACGGCATCG AGTACGACGA ACGCATCGAG
TTGCTCGATG AGGTGACCTA TCCCAAACCG CTGGCCGACC TGCTCGGTCA CGCGTATGAG
GTGTATCTGC AGAGCAATCC GTGGGCGGCC GACGGAAAGC TGTCACCGAA GTCCGTGGTG
CGCGAGATGT GGGAGCGCGG CATGACGTTC CGGGAGTACG TCAGCGAGTA CGGGCTGACT
CGCGCCGAGG GCGCCGTGCT GCGGTACCTG TCGGATGCGT TCAAGGCGCT GCGCTCCGGG
GTGCCCGCCG CCGCGCGCAC CGAGGAGCTC ACCGACATCG TGGAGTGGCT CGGCGAGCTT
GTGCGGCAGG TGGATTCGAG CCTGCTCGAC GAGTGGGAGC AGCTCACCAG TCCGGATCAA
CCGCACGACC AACCGGTCAC GGTGCCCGCG AAGCCCCGCC CGCTGACCGG CAACGAGCGC
GCGTTCACCG CGATGGTGCG CAACGCGCTG TTCCGGCGGG TCGAATTGTT CGCCCGCGAA
CGCTGGGACG AACTCGCGGC GCTCGACGGT CGCGGCGGAC TGTCCGCCCA GCGGTGGCGC
GAGATCGGCG ACGACTATTT CGACGAGCAC GACGACGTAG GGGTCGGCGC CGACGCCCGC
GGTCCGGCGC TGCTGATCAT CGACCGGCAG CGCGACGTGT GGCGGGTGCG CCAGATCCTC
GACGATCCCG CCGGCGACCA CGACTGGGGA TTCGAGGTCG AGGTCGACCT CGCGGCCTCC
GACGAGGAGG GCGCGCCGGT GCTGCGCCTC ACCGACGCGG GTCGCTTGGA CTGA
 
Protein sequence
MSAPLIADPG DDPDDVFAAF GAWAQENGTT LYPAQEEALI ELVSGSNVIL ATPTGSGKSL 
VATGAIYAQL AAGGVSFYTA PIKALVSEKF FALCEVFGAV NVGMLTGDAS VNADAPIIAC
TAEILANVAL REGRDADIGL CVMDEFHFYG DPDRGWAWQV PLLELPQAQF LLMSATLGDV
TFLREDLTRR TGRPTALVAN AERPVPLYFS YATTPMHETI QELIDTRQSP VYVVHFTQAS
ALERAQALMS VNVSSKAEKA AIAEHIGAFR FSSAFGSTLS RLVRHGIGVH HAGMLPKYRR
LVEQLAQAGL LKVICGTDTL GVGINVPIRT VVFSALSKYD GTRTRLLNAR EFHQIAGRAG
RAGFDTAGTV VVQAPDHEVE NLKQFAKVAD DPKKRRKLVR RKVPEGMVPW SEATLTKLVD
AVPEPLTSHM RVTTAMILDV VDRPGDPFAA MRRLLTDNHE PRKRQLRLIR EAVGIARSLL
QAGVLERVGE IGAPADGRRY RLTVDLPRDF ALNQPLSTFA LAAIGLLDAE SDQYALDIVS
VIEATLEDPR QILAAQLNRA RGEAVAQMKA DGIEYDERIE LLDEVTYPKP LADLLGHAYE
VYLQSNPWAA DGKLSPKSVV REMWERGMTF REYVSEYGLT RAEGAVLRYL SDAFKALRSG
VPAAARTEEL TDIVEWLGEL VRQVDSSLLD EWEQLTSPDQ PHDQPVTVPA KPRPLTGNER
AFTAMVRNAL FRRVELFARE RWDELAALDG RGGLSAQRWR EIGDDYFDEH DDVGVGADAR
GPALLIIDRQ RDVWRVRQIL DDPAGDHDWG FEVEVDLAAS DEEGAPVLRL TDAGRLD