Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1019 |
Symbol | |
ID | 4972346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 1066819 |
End bp | 1069332 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640455216 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001132290 |
Protein GI | 145221612 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTC CCCTGATCGC CGACCCCGGC GACGACCCTG ACGACGTGTT CGCCGCCTTC GGGGCGTGGG CGCAGGAGAA CGGCACCACG CTGTACCCGG CCCAGGAGGA GGCGCTGATC GAGCTGGTCA GCGGCTCCAA CGTCATCCTC GCCACCCCGA CCGGCTCCGG TAAGTCGCTG GTCGCCACCG GTGCGATCTA CGCCCAGCTC GCCGCCGGGG GCGTGAGTTT CTACACCGCG CCGATCAAGG CGCTGGTCAG CGAGAAGTTC TTCGCGCTGT GCGAGGTGTT CGGTGCGGTC AACGTCGGAA TGCTCACCGG CGACGCGTCG GTCAACGCGG ATGCGCCGAT CATCGCGTGC ACCGCGGAGA TCCTGGCCAA CGTCGCGCTG CGGGAGGGCC GGGACGCAGA CATCGGATTG TGCGTGATGG ACGAGTTCCA CTTCTACGGC GACCCCGACC GCGGCTGGGC GTGGCAGGTG CCGCTGCTGG AACTGCCGCA GGCCCAGTTC CTGTTGATGT CGGCCACGCT CGGAGACGTC ACCTTCCTGC GCGAGGACCT GACCCGGCGC ACCGGCCGCC CGACGGCGCT GGTGGCCAAC GCCGAGCGGC CGGTGCCGCT GTACTTCTCC TACGCGACGA CGCCGATGCA CGAGACCATC CAGGAGCTGA TCGACACCCG ACAGTCGCCG GTCTACGTCG TGCACTTCAC CCAGGCCTCG GCGCTGGAGC GGGCGCAGGC GCTGATGAGC GTCAACGTCA GCAGCAAGGC GGAGAAGGCG GCGATCGCCG AGCACATCGG CGCGTTCCGT TTCTCGTCGG CGTTCGGGTC GACGCTGTCG CGTCTGGTCC GGCACGGCAT CGGGGTGCAC CACGCCGGGA TGCTGCCCAA GTACCGCAGG CTGGTCGAAC AGCTGGCCCA GGCCGGCCTG CTCAAGGTCA TCTGCGGCAC CGACACGCTC GGGGTCGGCA TCAACGTTCC GATCCGCACC GTGGTGTTCT CGGCGCTGTC GAAATACGAC GGCACCCGCA CCCGGCTGCT CAACGCCCGC GAGTTCCACC AGATCGCCGG GCGCGCGGGG CGCGCCGGCT TCGACACCGC CGGCACCGTC GTCGTGCAGG CCCCCGACCA CGAGGTGGAG AACCTCAAGC AGTTCGCCAA GGTCGCCGAC GATCCGAAGA AACGCCGGAA GCTGGTGCGG CGCAAGGTCC CCGAGGGCAT GGTGCCGTGG AGCGAAGCCA CGCTGACCAA ACTGGTCGAC GCTGTCCCGG AACCTCTCAC GAGTCACATG CGGGTCACCA CGGCGATGAT CCTCGATGTC GTCGACCGTC CCGGGGATCC GTTCGCGGCG ATGCGGCGGC TGCTGACCGA CAACCACGAG CCGCGCAAGA GGCAGCTGCG GTTGATCCGC GAGGCGGTCG GTATCGCGCG GTCGCTGCTG CAGGCGGGGG TCTTGGAGCG GGTGGGCGAA ATTGGCGCAC CGGCCGACGG CAGGCGCTAC CGCTTGACCG TGGACCTGCC GCGCGACTTC GCCCTGAACC AGCCGCTGTC GACGTTCGCG CTGGCCGCCA TCGGCCTGCT CGACGCGGAG TCGGATCAGT ATGCGCTCGA CATCGTCTCG GTCATCGAGG CGACGCTGGA GGACCCCCGC CAGATCCTGG CCGCGCAGCT GAACCGGGCC CGGGGCGAGG CCGTCGCGCA GATGAAGGCC GACGGCATCG AGTACGACGA ACGCATCGAG TTGCTCGATG AGGTGACCTA TCCCAAACCG CTGGCCGACC TGCTCGGTCA CGCGTATGAG GTGTATCTGC AGAGCAATCC GTGGGCGGCC GACGGAAAGC TGTCACCGAA GTCCGTGGTG CGCGAGATGT GGGAGCGCGG CATGACGTTC CGGGAGTACG TCAGCGAGTA CGGGCTGACT CGCGCCGAGG GCGCCGTGCT GCGGTACCTG TCGGATGCGT TCAAGGCGCT GCGCTCCGGG GTGCCCGCCG CCGCGCGCAC CGAGGAGCTC ACCGACATCG TGGAGTGGCT CGGCGAGCTT GTGCGGCAGG TGGATTCGAG CCTGCTCGAC GAGTGGGAGC AGCTCACCAG TCCGGATCAA CCGCACGACC AACCGGTCAC GGTGCCCGCG AAGCCCCGCC CGCTGACCGG CAACGAGCGC GCGTTCACCG CGATGGTGCG CAACGCGCTG TTCCGGCGGG TCGAATTGTT CGCCCGCGAA CGCTGGGACG AACTCGCGGC GCTCGACGGT CGCGGCGGAC TGTCCGCCCA GCGGTGGCGC GAGATCGGCG ACGACTATTT CGACGAGCAC GACGACGTAG GGGTCGGCGC CGACGCCCGC GGTCCGGCGC TGCTGATCAT CGACCGGCAG CGCGACGTGT GGCGGGTGCG CCAGATCCTC GACGATCCCG CCGGCGACCA CGACTGGGGA TTCGAGGTCG AGGTCGACCT CGCGGCCTCC GACGAGGAGG GCGCGCCGGT GCTGCGCCTC ACCGACGCGG GTCGCTTGGA CTGA
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Protein sequence | MSAPLIADPG DDPDDVFAAF GAWAQENGTT LYPAQEEALI ELVSGSNVIL ATPTGSGKSL VATGAIYAQL AAGGVSFYTA PIKALVSEKF FALCEVFGAV NVGMLTGDAS VNADAPIIAC TAEILANVAL REGRDADIGL CVMDEFHFYG DPDRGWAWQV PLLELPQAQF LLMSATLGDV TFLREDLTRR TGRPTALVAN AERPVPLYFS YATTPMHETI QELIDTRQSP VYVVHFTQAS ALERAQALMS VNVSSKAEKA AIAEHIGAFR FSSAFGSTLS RLVRHGIGVH HAGMLPKYRR LVEQLAQAGL LKVICGTDTL GVGINVPIRT VVFSALSKYD GTRTRLLNAR EFHQIAGRAG RAGFDTAGTV VVQAPDHEVE NLKQFAKVAD DPKKRRKLVR RKVPEGMVPW SEATLTKLVD AVPEPLTSHM RVTTAMILDV VDRPGDPFAA MRRLLTDNHE PRKRQLRLIR EAVGIARSLL QAGVLERVGE IGAPADGRRY RLTVDLPRDF ALNQPLSTFA LAAIGLLDAE SDQYALDIVS VIEATLEDPR QILAAQLNRA RGEAVAQMKA DGIEYDERIE LLDEVTYPKP LADLLGHAYE VYLQSNPWAA DGKLSPKSVV REMWERGMTF REYVSEYGLT RAEGAVLRYL SDAFKALRSG VPAAARTEEL TDIVEWLGEL VRQVDSSLLD EWEQLTSPDQ PHDQPVTVPA KPRPLTGNER AFTAMVRNAL FRRVELFARE RWDELAALDG RGGLSAQRWR EIGDDYFDEH DDVGVGADAR GPALLIIDRQ RDVWRVRQIL DDPAGDHDWG FEVEVDLAAS DEEGAPVLRL TDAGRLD
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