Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_0859 |
Symbol | |
ID | 4972187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 894029 |
End bp | 894682 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640455057 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_001132131 |
Protein GI | 145221453 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.774142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0091053 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCAAGA AGTACGGGGT GAAAGAGAAG GACCTCGTGG TCACTCACGT GGTCAACATG GTGCTGACCG GTCGGCTCCG GTCCGGAGAT CGCCTGGACC GCAACGAGAT TGCGAGTGAG CTCGGGTTGA GCCGGGTGCC TGTCCAGGAG GCCGTGGTCC AGCTCGAGCA CGACGGGATC CTGTCGACCC GTTACCACCG CGGTGCCTTC GTCGAGAGGT TCGACGAGTC GACCGTCCGG GAACACCACG AGCTCTACGG AGTGCTCTGC GGGCTCGCGT CCGGACGCGC CGCCACCGCG TCGGAGCCGA CGGTCCTCGC CGACCTTGAG GCGGCGACCG CTCAGATGCG CAGCGGGCGC GACTCCCGGC AGTTCGACAG CCACGCCCGG CGATTCCGAT CGATCATCAA CGGCGAATAC GCCGGACCGC GTCTGCAGGC CGCCATCGAC GCGTCACAGA CACTCATCCC GCACGCCTTC TGGCAGTCCT ACCTGCAGCA CCGCGACCAG CTGCTGCCCT TCTACGAATC CGAGCTGACC GCGATCCGCG ACCGGGACCC CGACGCCGCC CGGGCCGCCT GCGCGCAGCG ATCCGACGTG ATGGCGTGCG CCCTGCTGAC CGAACTGGTG CGTCGCGGCG TGCTGCGCAG GTAA
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Protein sequence | MPKKYGVKEK DLVVTHVVNM VLTGRLRSGD RLDRNEIASE LGLSRVPVQE AVVQLEHDGI LSTRYHRGAF VERFDESTVR EHHELYGVLC GLASGRAATA SEPTVLADLE AATAQMRSGR DSRQFDSHAR RFRSIINGEY AGPRLQAAID ASQTLIPHAF WQSYLQHRDQ LLPFYESELT AIRDRDPDAA RAACAQRSDV MACALLTELV RRGVLRR
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