Gene Mflv_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0796 
Symbol 
ID4972125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp817060 
End bp817854 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID640454991 
Productpolysaccharide deacetylase 
Protein accessionYP_001132068 
Protein GI145221390 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGT TCCGCTGGCC GGACGGCAAG ACCGCCGCCG CCGCCTTCAC CTTCGACGTC 
GACGCCGAGT CGGCGGTGCT GTGGGGCGAC GAGAGTGTCG GCGCGCGGAT GAGCGTGATG
AGCCACCAGG CCTACGGCCC GCTGGTGGGT ATCCCACGCA TCCTGGATCT GCTTGAGCAG
CACCAGATCA CCTCGACGTT CTTCGTGCCG GGACATACCG CGGACAGGTA TCCCGAGGCG
GTGCGCAGCA TCGTGGGCGC CGGACACGAG ATCGCCCACC ACGGGTACCT CCACGAGCAG
CCCACAGCGC TCACCCTGGA GGAGGAGATC GACGCACTCG ACCGTGGTCT CGCGGCGCTC
GCGGACGTCG CCGGTGTGCG TCCCGCCGGG TATCGGGCGC CGATGTGGGA TCTATCCTGG
CGCACCCCGG CACTGCTGGC CGAGCGCGGA TTCCTGTACG ACTCAAGCCT GATGGACGCC
GACCATCCCT ACGAGCTGGC GGTGACCCCG GGGGCTGCGC AGTCGTTGGT CGAGATCCCG
ATCCAGTGGG CGCTCGACGA CTGGGAGCAG TACTGCTTTC TGCCCGACAT CTCGGGCAGC
GGCCTGATCG AGAGCCCGCG CAAGGCTCGC GAACTCTGGC AGCTCGAGTT CGACGCGCTG
CGCCGGGTCG GTGGCTGCTG GGTGCTGACG AACCATCCCT TCCTGACCGG CAGGCCGTCG
CGGGCCGCGG AGCTGGGCGA ACTGATGCGC TACGTGCTCG ACCACGATGA CGTGTGGGTG
GTGTCGCAAG CGTGA
 
Protein sequence
MDAFRWPDGK TAAAAFTFDV DAESAVLWGD ESVGARMSVM SHQAYGPLVG IPRILDLLEQ 
HQITSTFFVP GHTADRYPEA VRSIVGAGHE IAHHGYLHEQ PTALTLEEEI DALDRGLAAL
ADVAGVRPAG YRAPMWDLSW RTPALLAERG FLYDSSLMDA DHPYELAVTP GAAQSLVEIP
IQWALDDWEQ YCFLPDISGS GLIESPRKAR ELWQLEFDAL RRVGGCWVLT NHPFLTGRPS
RAAELGELMR YVLDHDDVWV VSQA