Gene Mflv_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0519 
Symbol 
ID4971594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp550171 
End bp551193 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content68% 
IMG OID640454723 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_001131800 
Protein GI145221122 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.112614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACACC CGATGCGTAA GCTGCTTTTC GTGACCGTCT TGGCTCTCGA CGAGGGCGGT 
GCGAAGGACG CGTTTCTCGC CGATGCACAG AAGTACCGGC GCGAACTGCT GGCGCACTGT
TACCGCATGA CCGGCTCGCT CCACGACGCG GAGGACCTGG TCCAGGAAAC ATATCTGCGG
GCCTGGAAGT CCTACGACAG GTTCGAAGGC AAATCCTCGG TGCGGACGTG GCTGTACCGG
ATCGCGACCA ACACCTGCCT GACCGCGCTC GACGGGCGCA AGCGCCGGCC GCTGCCGTCG
GGCCTCGGCG GGCCGTCGGC AGACCCCTAC GCCGACCTGA CCGAGCGCCA CGAGATCGCC
TGGCTCGAGC CGATCCCCGA CGACCCGCAT GAGGATCCGG CCGACCCGTC GGTGATCGCG
GAGTCCCGGG AGTCGGTGCG GCTGGCGCTC ATCGCGGCAC TGCAGCACCT GTCCCCACGC
CAGCGGGCGG TTCTGGTGCT GCGCGAAGTC CTGCAATGGA AGGCGGCCGA GGTCGGTGAG
GTGATCGGGG CGTCGACCGC CGCGGTCAAC AGCCTGTTGC AGCGCGCCCG GGCGCAGCTC
GACGAGGTCG CACCCTCGCG CGACGATCAG CCGGTTTCAC CGGAATCCCC GCAGGCGGCA
GAGGCGCTCG CGAAGTACAT CGCCGCGTTC GAGGACTACG ACATGGACAG GCTGGTCGAG
CTGTTCACCG CCGATGCGGT GTGGGAAATG CCGCCGTTCG ACGGCTGGTA TTCGGGTCCG
GCGGACATCA TCGCGCTGTC GAAGTACCAC TGCCCCGCCG CCGGCGCGGG CGATATGCGG
TTCCTGAGGA CCACGGCCAA CGGTCAGCCG GTGGCCGCGC TGTACATGCG CAACCCGGAG
ACCAACGTGC ACGAGGCGTT CCAGCTGCAC GTCCTCGACC TGCGCACCCG AGGCATCGCA
CACGTCGTCG CGTTCATGGA CGTGTCGCTG TTCCGCAAGT TCGGTCTGCC CGAGACGCTC
TGA
 
Protein sequence
MSHPMRKLLF VTVLALDEGG AKDAFLADAQ KYRRELLAHC YRMTGSLHDA EDLVQETYLR 
AWKSYDRFEG KSSVRTWLYR IATNTCLTAL DGRKRRPLPS GLGGPSADPY ADLTERHEIA
WLEPIPDDPH EDPADPSVIA ESRESVRLAL IAALQHLSPR QRAVLVLREV LQWKAAEVGE
VIGASTAAVN SLLQRARAQL DEVAPSRDDQ PVSPESPQAA EALAKYIAAF EDYDMDRLVE
LFTADAVWEM PPFDGWYSGP ADIIALSKYH CPAAGAGDMR FLRTTANGQP VAALYMRNPE
TNVHEAFQLH VLDLRTRGIA HVVAFMDVSL FRKFGLPETL