Gene Mflv_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0378 
Symbol 
ID4971454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp378930 
End bp379826 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content72% 
IMG OID640454583 
Producturea amidolyase related protein 
Protein accessionYP_001131660 
Protein GI145220982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00676966 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCCG TCACGCTGGA GATCCTGCAG CCAGGACCCC TGGCGCTCGT CGAGGATCTC 
GGCAGGCCCG GCCTGTCCCA TATCGGCGTG ACCCGATCCG GGGCCGCGGA CCGGCGCGCC
CACACCCTGG CCAACCGGCT CGTCGCCAAC CCTGACGACC GCGCCACCGT CGAGGTCACC
CTCGGTGGAT TCACGGCCCG AGTGCACGAC GGCAACGGGG ACGGCGTCGC GATCGCGGTG
ACCGGGGCCG ACGCCAACCC GTCGGTCAAC GGTGTTCCGT TCGGCACCAA CAGCATTCAC
CACGCCCACG ACGGCGAGGT GATCTCGCTG GCACCGCCGC GGTCAGGTCT GCGGTCCTAC
CTCGCGGTGC GCGGCGGGAT CGATGTACGG CCCGTGCTCG GGTCGCGCAG CTACGACGTG
ATGTCGGCGA TCGGGCCGGG GCCGCTGCGT GCCGGCGACG TGCTGCCCGT CGGCCCGCAC
ACCGACGACT TTCCCGAACT CGATCAGGCC CCGGTCGCGG CGATCGACGA CGACTTTCTC
GAGCTCAAGG TGGTGCCCGG CCCGCGCGAC GACTGGTTCG TCGACCCCGA CGTGCTGATC
CGCACCAACT GGCAGGTGAC CAACCGCAGT GACCGCGTCG GGATGCGACT GGTCGGCATG
CCGCTGGAGT ACCGCAGCCC CGACCGCCAG CTCCCCAGCG AGGGGGCCAC CCGCGGCGCG
ATCCAGGTCC CGCCCAACGG CTTCCCGGTG ATCCTCGGCC CCGACCACCC CGTCACCGGC
GGCTACCCGG TCATCGGCGT CGTCACCGAC GACGACATCG ACAAGATCGC GCAGGCCCGG
CCGGGCCAGA CCGTCCGGCT GCACTGGTCG CGTCCGCGCC GTCCGTGGGA GTCCTGA
 
Protein sequence
MSAVTLEILQ PGPLALVEDL GRPGLSHIGV TRSGAADRRA HTLANRLVAN PDDRATVEVT 
LGGFTARVHD GNGDGVAIAV TGADANPSVN GVPFGTNSIH HAHDGEVISL APPRSGLRSY
LAVRGGIDVR PVLGSRSYDV MSAIGPGPLR AGDVLPVGPH TDDFPELDQA PVAAIDDDFL
ELKVVPGPRD DWFVDPDVLI RTNWQVTNRS DRVGMRLVGM PLEYRSPDRQ LPSEGATRGA
IQVPPNGFPV ILGPDHPVTG GYPVIGVVTD DDIDKIAQAR PGQTVRLHWS RPRRPWES