| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0354 |
|---|
| Symbol | |
|---|
| ID | 4971430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 356404 |
|---|
| End bp | 357480 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640454559 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001131636 |
|---|
| Protein GI | 145220958 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.360809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.699782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGA CGCCCCTGGC GGAGCGCCTT CTCGACATCA CCCGGATCTA CCACGAGCCG
GGCGTCGAGC ACTCTGCCCG CGCTGCCGAG GTGCTCGCGC GTTTCCCCGC CGCAGAGCGC
ATCGAGGTGC CGTCCCATCA GGCGATACCT GGCCTGTACG GCAACGCCGG CAACATCGGG
GACTGGGTGC GGATCAAGCA GCAGGTGCTG GTCCTCGGTG AGAAGAAGAG CCTGACCGCA
CGGCGCAACG AACGGTCGAG CGACTGGATC GCGCCGTCCA CGGCGAACGG CTGCGCGATG
GCGTGCGCCT ACTGCTACGT GCCGCGGCGC AAGGGCTACG CGAACCCGAT CACGGTGTTC
ACCAACATCG ACGCAATCGT CGGTTACCTC GAGCGTCATG CCGCCCGCCA GGGCGTCAAA
CCCGAGCCGA ACCAGTGCGA TCCGGCGGAC TGGGTCTACG ACATCGGCGA GAACTGCGAC
TGCTCGGTCG ACGCGATGGT GTCCGACAAC GTCGCGGACC TCGTCGCCCT GTTCGCGCGA
CTGCCCCACG CCAAGGCCAG TTTCGCGACC AAGCTGGTCA ACCCGGATCT GCTGACCTAC
GAGCCGCGCG GCGGCACCCG CATCCGGTTC AGCCTGATGC CGGGCGAGAC GTCGCGGCTG
GTCGACATCC GTACCTCCGG GGTCGCCGAC CGCATCGCGG CCCTCGATGA CTTCGTCGAG
GCCGGCTACG AGGTCCACCT GAACTTCAGC CCGGTCATCG TGCACGAGAC CTGGCGCGCC
GACTGGGCCG AGCTGCTGGA ACAGATCGCC GACAACACCA GCGAACGCAC CCGCCGCCAG
CTCGCCGCCG AGATCATCTT CCTGACCCAC AATGAGGGCC TGCACGACAT CAACCTGGGG
TGGCACCCCA AAGCCGAGGA CCTGCTGTGG CGGCCCGACC TGCAGCAACC CAAACGCAGC
CAGAACGGGC AGCTCAACGT CCGCTACCGG ACCGGGTGGA AAGGACGCTG GGTGCGTCAG
CTCACCGACC TGGTCGCCGA GAAGCTGCCG GACTGCCGGA TCCGCTATGC CTTCTGA
|
|---|
| Protein sequence | MTATPLAERL LDITRIYHEP GVEHSARAAE VLARFPAAER IEVPSHQAIP GLYGNAGNIG
DWVRIKQQVL VLGEKKSLTA RRNERSSDWI APSTANGCAM ACAYCYVPRR KGYANPITVF
TNIDAIVGYL ERHAARQGVK PEPNQCDPAD WVYDIGENCD CSVDAMVSDN VADLVALFAR
LPHAKASFAT KLVNPDLLTY EPRGGTRIRF SLMPGETSRL VDIRTSGVAD RIAALDDFVE
AGYEVHLNFS PVIVHETWRA DWAELLEQIA DNTSERTRRQ LAAEIIFLTH NEGLHDINLG
WHPKAEDLLW RPDLQQPKRS QNGQLNVRYR TGWKGRWVRQ LTDLVAEKLP DCRIRYAF
|
|---|
| |