Gene Mflv_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0305 
Symbol 
ID4971381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp302731 
End bp303516 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID640454510 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001131587 
Protein GI145220909 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.863836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.150227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAA CCTCCGCGAA TCCTTTCGAT CTGACCGGCC ACGTGGCCGT CGTGACCGGC 
GGCGGCTCCG GCATCGGTCT CGGGATGGCC GGAGGGCTTG CCCGCGCCGG AGCGACCGTG
GCGATCCTCG GCCGCAACGC ACAACGCCTC GACGATGCCG CGGCCACGCT GCGCACCCAC
GGCAACCCTG TGCTGCCCCT GGTGTGCGAC GTCACCGACG AGGAGGCCGT CACCGAGACC
ATGGCGCGCA TACGTGACGA ATTCGGTTGG CTTGATTCCT GTTTCGCCAA CGCCGGGGTG
CGGGGGCGGT TCACCCCGGT ACTGGAGACC TCGCTGGCGG AGTTCCGGTC GGTGACCAGC
GTCGACCTCG ACGGCGTGTT CCTGACCCTG CGGGAGGCGG CGCGACAGAT GGTCGCCGCA
GGTCGGGGCG GGAGCCTGGT CGGGGTGTCG AGCCTCGGCG CCTTCCAGGG CATGCCCCGG
CAGCCGGCCT ACGCGGCGTC CAAGGCCGGC GTCACGTCGA TGATGGACAG CTTCGCGGTG
GAGTTGGCCC GGCACGGCAT CCGCGCCAAC ACGGTGGCCC CGGGATGGTT CGAGACCGAG
ATGACGTCCG AGGGGATGGC CGACGAGAGG TTCACCTCCC GCGTCCTGCC GCGTGTTCCG
GTGCGGCGCT GGGGCGCGGC CGAGGACGTC GCCGGCGTCG GCGTCGCGGT GTACCTGGCC
GGCCCGGCCA GTGCCTATCA CACCGGGGAC GTGCTGCGGC TCGACGGCGG CTACCTGAAG
TTCTGA
 
Protein sequence
MTTTSANPFD LTGHVAVVTG GGSGIGLGMA GGLARAGATV AILGRNAQRL DDAAATLRTH 
GNPVLPLVCD VTDEEAVTET MARIRDEFGW LDSCFANAGV RGRFTPVLET SLAEFRSVTS
VDLDGVFLTL REAARQMVAA GRGGSLVGVS SLGAFQGMPR QPAYAASKAG VTSMMDSFAV
ELARHGIRAN TVAPGWFETE MTSEGMADER FTSRVLPRVP VRRWGAAEDV AGVGVAVYLA
GPASAYHTGD VLRLDGGYLK F