Gene Mflv_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0299 
Symbol 
ID4971375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp294875 
End bp296671 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content70% 
IMG OID640454504 
ProductLipocalin family protein 
Protein accessionYP_001131581 
Protein GI145220903 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0437808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC AACGATGGGC GATCTGGCTG GGCGCGTTCG GCGCCGGCGC GTGCATCGCG 
CTGGGGGCGG GCCACGGTGT CGCTGCCGCC GACAGTGACA CTGCCGACGC GGCCGACACC
TCCAGCCAGT CCGCCGAAAC CCGGACCGCC GCAGATCAGC CGGCGGCACG CGAGCCGGAC
GAGCCCGAGG CCCGAGAAAC CGAGGCTGAG GCCGAGGAAA CCGATGCCGA CGCCGCGGCG
GAATCCGAGG GCGAAGGCGC CGACACCGAC GACACCGCCG ACGTGACCGC CGAGGAGGAC
GCCGCGGTCG AGTCGGCCTC CGCCCGGAAA CCGCGGGCCG AACGTCGCGA GGCGGTCGCT
GAGGCAGCCT CAGAGACAGA GCCCGCGTCC GAGCAAGCGC CCGAGCCCGC GCAGACGCCC
GCCGCACCGA CACAGGCGGT CGCGTCCGCG CCGACCGGCG TCAAGACCGG TCGCGCCCCG
CTCACCATCC CGGTCGGCGA CAAGGGCTAC AGGACCCGGG CCGACTGGTA CCTGCCGACC
CAGGGCGACG GCACGGTCAC CGCGACGGGG GTGATCTGGC TGCAGCACGG CTTCCTCGGC
AACAAGTCGT TCGTCTCCGC GCTCGCGCGG AACCTGTCCC AGCAGACCAA CAGCATCGTC
GTGGCGCCCA ACCTCTCGTC GTTCCCTCTC GCCTGCGCCG CCTGCTGGAT CAACGGCGTC
CCGATGCGTG AAGCCGTCGC GGGCATGTTC CTCGACCAGC GGACGTCGCT GACCGCGAGC
GCCCAGGCCG CCGGGTACGT GGGTGCCCTG CCCGAGGACT TCGTGCTGTC GGGGCAGTCG
GCGGGCGGCG GGTTCGCCGC AGCGGTCGGC GGTTTTTACG CGGCGAATCC CCTCGGCGAC
AACGACTTAC GCGGTGTGGT GATGTTCGAC GGCTTCGCCT TCGACGGCGC GCTCGCCGAC
AGTCTGGCAA AGCTCGACGA TCCGTTCGTC CCGGTGTATC AGATCGCCGC GCCCTCCCAG
CCGTGGAACG GCAAAGGTTC CTCCACAAGG GAATTGGTGG TGGCGCGACC AGATCAGTTC
GTCGGGGTCA CGCTCGCCGG AGGATCGCAC TCCGACTCGC TGCTCGGCGG CAACCCGATC
ACTGACCTGC TGCTCCAGTT GGTGACGGGA CGCTCGCCGG CCGGCAACAC CGCGGCCGCC
TACACGCTGG CCAACGGGTG GATCAACGAC ATGTACGCGG GGCTGGGTCC GGCCGACGGC
ACCGGCATCT ACGGCACCCC CGACCAGTAC ATCGTCATGG GCGACACCGC CGCCGTCGTG
CTCGCTCCCC CGCCGCCGGT CGACCTCGAC CGCTACCTGG GGACCTGGTT CGAGGTCGGC
AGCGTGAAGC AGTTCTTCTC GATCGGCCTG GTCAACACCA AGGCGCAGTA CAGCCTCAAC
CCCGACGGCT CTGTCAGGGT CGAGAACTCC GGCAACTACT TCGTCAACAA CGGCCCGCAG
TCCTCGATCG TCGGCTCGGC CCTGCCGGTC GACGCCACGA ACAACCGGCT CACCGTGCGG
TTCTTCGGTC CTCCGTCGGC CGCGCCGCCG GGCAACTACT GGATCGTCGA TCTGGATCCC
GAGTACCGGT GGGCCGTCGT CACCGATCCC ACGGGTCTGA GCGGATTCCT GCTCAGCCGC
GAGGCCGTCG TCACCGACGC CTTCTACCGG GAACTGCTCG ACCGGGCTTC CGTGTACGGG
GTGAAGGCAC GCATCACGCC CACCCGCCAG CCCGCGGCGC AGACGACTAC CATTTGA
 
Protein sequence
MTSQRWAIWL GAFGAGACIA LGAGHGVAAA DSDTADAADT SSQSAETRTA ADQPAAREPD 
EPEARETEAE AEETDADAAA ESEGEGADTD DTADVTAEED AAVESASARK PRAERREAVA
EAASETEPAS EQAPEPAQTP AAPTQAVASA PTGVKTGRAP LTIPVGDKGY RTRADWYLPT
QGDGTVTATG VIWLQHGFLG NKSFVSALAR NLSQQTNSIV VAPNLSSFPL ACAACWINGV
PMREAVAGMF LDQRTSLTAS AQAAGYVGAL PEDFVLSGQS AGGGFAAAVG GFYAANPLGD
NDLRGVVMFD GFAFDGALAD SLAKLDDPFV PVYQIAAPSQ PWNGKGSSTR ELVVARPDQF
VGVTLAGGSH SDSLLGGNPI TDLLLQLVTG RSPAGNTAAA YTLANGWIND MYAGLGPADG
TGIYGTPDQY IVMGDTAAVV LAPPPPVDLD RYLGTWFEVG SVKQFFSIGL VNTKAQYSLN
PDGSVRVENS GNYFVNNGPQ SSIVGSALPV DATNNRLTVR FFGPPSAAPP GNYWIVDLDP
EYRWAVVTDP TGLSGFLLSR EAVVTDAFYR ELLDRASVYG VKARITPTRQ PAAQTTTI