Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_0299 |
Symbol | |
ID | 4971375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 294875 |
End bp | 296671 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640454504 |
Product | Lipocalin family protein |
Protein accession | YP_001131581 |
Protein GI | 145220903 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0437808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCTC AACGATGGGC GATCTGGCTG GGCGCGTTCG GCGCCGGCGC GTGCATCGCG CTGGGGGCGG GCCACGGTGT CGCTGCCGCC GACAGTGACA CTGCCGACGC GGCCGACACC TCCAGCCAGT CCGCCGAAAC CCGGACCGCC GCAGATCAGC CGGCGGCACG CGAGCCGGAC GAGCCCGAGG CCCGAGAAAC CGAGGCTGAG GCCGAGGAAA CCGATGCCGA CGCCGCGGCG GAATCCGAGG GCGAAGGCGC CGACACCGAC GACACCGCCG ACGTGACCGC CGAGGAGGAC GCCGCGGTCG AGTCGGCCTC CGCCCGGAAA CCGCGGGCCG AACGTCGCGA GGCGGTCGCT GAGGCAGCCT CAGAGACAGA GCCCGCGTCC GAGCAAGCGC CCGAGCCCGC GCAGACGCCC GCCGCACCGA CACAGGCGGT CGCGTCCGCG CCGACCGGCG TCAAGACCGG TCGCGCCCCG CTCACCATCC CGGTCGGCGA CAAGGGCTAC AGGACCCGGG CCGACTGGTA CCTGCCGACC CAGGGCGACG GCACGGTCAC CGCGACGGGG GTGATCTGGC TGCAGCACGG CTTCCTCGGC AACAAGTCGT TCGTCTCCGC GCTCGCGCGG AACCTGTCCC AGCAGACCAA CAGCATCGTC GTGGCGCCCA ACCTCTCGTC GTTCCCTCTC GCCTGCGCCG CCTGCTGGAT CAACGGCGTC CCGATGCGTG AAGCCGTCGC GGGCATGTTC CTCGACCAGC GGACGTCGCT GACCGCGAGC GCCCAGGCCG CCGGGTACGT GGGTGCCCTG CCCGAGGACT TCGTGCTGTC GGGGCAGTCG GCGGGCGGCG GGTTCGCCGC AGCGGTCGGC GGTTTTTACG CGGCGAATCC CCTCGGCGAC AACGACTTAC GCGGTGTGGT GATGTTCGAC GGCTTCGCCT TCGACGGCGC GCTCGCCGAC AGTCTGGCAA AGCTCGACGA TCCGTTCGTC CCGGTGTATC AGATCGCCGC GCCCTCCCAG CCGTGGAACG GCAAAGGTTC CTCCACAAGG GAATTGGTGG TGGCGCGACC AGATCAGTTC GTCGGGGTCA CGCTCGCCGG AGGATCGCAC TCCGACTCGC TGCTCGGCGG CAACCCGATC ACTGACCTGC TGCTCCAGTT GGTGACGGGA CGCTCGCCGG CCGGCAACAC CGCGGCCGCC TACACGCTGG CCAACGGGTG GATCAACGAC ATGTACGCGG GGCTGGGTCC GGCCGACGGC ACCGGCATCT ACGGCACCCC CGACCAGTAC ATCGTCATGG GCGACACCGC CGCCGTCGTG CTCGCTCCCC CGCCGCCGGT CGACCTCGAC CGCTACCTGG GGACCTGGTT CGAGGTCGGC AGCGTGAAGC AGTTCTTCTC GATCGGCCTG GTCAACACCA AGGCGCAGTA CAGCCTCAAC CCCGACGGCT CTGTCAGGGT CGAGAACTCC GGCAACTACT TCGTCAACAA CGGCCCGCAG TCCTCGATCG TCGGCTCGGC CCTGCCGGTC GACGCCACGA ACAACCGGCT CACCGTGCGG TTCTTCGGTC CTCCGTCGGC CGCGCCGCCG GGCAACTACT GGATCGTCGA TCTGGATCCC GAGTACCGGT GGGCCGTCGT CACCGATCCC ACGGGTCTGA GCGGATTCCT GCTCAGCCGC GAGGCCGTCG TCACCGACGC CTTCTACCGG GAACTGCTCG ACCGGGCTTC CGTGTACGGG GTGAAGGCAC GCATCACGCC CACCCGCCAG CCCGCGGCGC AGACGACTAC CATTTGA
|
Protein sequence | MTSQRWAIWL GAFGAGACIA LGAGHGVAAA DSDTADAADT SSQSAETRTA ADQPAAREPD EPEARETEAE AEETDADAAA ESEGEGADTD DTADVTAEED AAVESASARK PRAERREAVA EAASETEPAS EQAPEPAQTP AAPTQAVASA PTGVKTGRAP LTIPVGDKGY RTRADWYLPT QGDGTVTATG VIWLQHGFLG NKSFVSALAR NLSQQTNSIV VAPNLSSFPL ACAACWINGV PMREAVAGMF LDQRTSLTAS AQAAGYVGAL PEDFVLSGQS AGGGFAAAVG GFYAANPLGD NDLRGVVMFD GFAFDGALAD SLAKLDDPFV PVYQIAAPSQ PWNGKGSSTR ELVVARPDQF VGVTLAGGSH SDSLLGGNPI TDLLLQLVTG RSPAGNTAAA YTLANGWIND MYAGLGPADG TGIYGTPDQY IVMGDTAAVV LAPPPPVDLD RYLGTWFEVG SVKQFFSIGL VNTKAQYSLN PDGSVRVENS GNYFVNNGPQ SSIVGSALPV DATNNRLTVR FFGPPSAAPP GNYWIVDLDP EYRWAVVTDP TGLSGFLLSR EAVVTDAFYR ELLDRASVYG VKARITPTRQ PAAQTTTI
|
| |