Gene Mflv_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0292 
Symbol 
ID4971368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp287405 
End bp288793 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID640454496 
Producthypothetical protein 
Protein accessionYP_001131574 
Protein GI145220896 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00960981 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCACTCAG CTCCAGCCAT GGAAACGGGC CTCTACGCCG CCCCGTCGAA GCCGCGCGTC 
AGCAAGTTCC TCGCTGCCGG TGTCGCCGTC GTCGGAGCCG GTGCCGTCGC CATCACCCCG
GTGTCCCCGA TCGTCGCCGA CGATGTCCGC AGCCAGACCC ACGCGGTGGC GCTGACCGCC
GCCGCCAACC CGACGTACGG CAGCGACACC TCCGCTGTGT ACGGCAACCT GTTCAGTCAG
TCCTCCGCGA ACTTCCAGAA CCTCTTCCAG GCGTTCGCGA GCGATCCCTT CCCGATCCTG
AGCCAGGTGG CCGCCAACCA GTGGGCCTAC GGCACGAAGT TCCTCAGCGG ATTCTCGGGC
GTTTCGGAGT CGTTCAACTC GTGGTGGACG GGCGCCAACG GCAAGGCGAT GATCGAGGCC
GGGTTCGAGC ACTTCAGCAA CGGTGAGTTC GCCGATGGCT GGGACCGGCT CAACCGTTCG
TTCGTCTACG CGCTGAACAT CGGTTCGCCG CTGTACTCCG CGTTCTGGTC GCAGGCCCCC
AGCCAGCGGA ATCCCGAAGG CAACATGGGC ATTCCGGAGC AGATGGCGAT CAATTTCCAG
CAGGTCGTCT CGCTGGTCTT CGACCGCAAC TCGATCGTCA ACGAGATGAC GAAGACGGTG
CTGGGGCCGT TCCTCGGACT GGGCTTCGAG GTCGCACTGC TCGCTGACGC CGTCACCCTC
GCGATGAAGG AAGGCGACGG CGAAGGACTG GTCCGCGCGC TCGTCAACGC GCCCGGCGTC
ATGCTGAACA CCTTCCTCAA CGGCTACGTC AACCCCGAGT GCGAGGGCAG CAACTGCGAG
GTGTTCCCGG GTCTGATCAA CGCCGGAGGC ACCCTGATCA GCCTGTTCTC CGAGCTCCCG
AAGGCAATCG CCGAGGCGCT CAAGCCGGAT CCGGTGCCGG GCGCCCCCTG GACCCCGCCG
GCTCCGAGCC TCGCCGCCGT GGATTCGACC ACCATGCTCG CTGCGCGCAC GGTCACGCTG
GAGATCGAGT CGGCCGCTCC GGCGACCGAG ACCGAGCAGG CAGAGACCGC GCCGGTCGCC
GACGAGGCGG CTCCGGTCGA GGACGTGGTC GCCCCCGTCG AGGAGACCGA AGAGGCTGAC
GAGACCGCTC CGGTCACCGA AGAAGCCGAG ACCGAGGCCG GCACCGAGGA AGCCGCCACC
GAGGAGGACG GCGACGCCGA GGCGCCCGCC GCCGACGAGT CGGATTCGGA CTCGAAGGAC
AGCGACGACT CGGGCGATGC CCGCAAGTCC GGCAAGCCGG CCCAGGCCGA ACGGTCCTCG
GGCAGCAGCG ACAGCTCCGA CAGCGGCAGC AGCAGCTCGG ACTCCGGCAG CTCGGGCAGC
GACGACTAG
 
Protein sequence
MHSAPAMETG LYAAPSKPRV SKFLAAGVAV VGAGAVAITP VSPIVADDVR SQTHAVALTA 
AANPTYGSDT SAVYGNLFSQ SSANFQNLFQ AFASDPFPIL SQVAANQWAY GTKFLSGFSG
VSESFNSWWT GANGKAMIEA GFEHFSNGEF ADGWDRLNRS FVYALNIGSP LYSAFWSQAP
SQRNPEGNMG IPEQMAINFQ QVVSLVFDRN SIVNEMTKTV LGPFLGLGFE VALLADAVTL
AMKEGDGEGL VRALVNAPGV MLNTFLNGYV NPECEGSNCE VFPGLINAGG TLISLFSELP
KAIAEALKPD PVPGAPWTPP APSLAAVDST TMLAARTVTL EIESAAPATE TEQAETAPVA
DEAAPVEDVV APVEETEEAD ETAPVTEEAE TEAGTEEAAT EEDGDAEAPA ADESDSDSKD
SDDSGDARKS GKPAQAERSS GSSDSSDSGS SSSDSGSSGS DD