| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0219 |
|---|
| Symbol | |
|---|
| ID | 4971841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 205646 |
|---|
| End bp | 206869 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640454424 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_001131502 |
|---|
| Protein GI | 145220824 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.897628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCCCG AACCCGATTC CGTTCCGTCG GTCCGGATAC CGACGCCGTT GCCCGACGGC
GTCGGTCAGG CCACCATCGG TGTGCGGGGC GGACTGCTGC GGTCGGGGTT CGAGGAGACC
GCGGAGGCGA TCTACCTGAC GTCCGGGTAC GTCTACGAAT CGGCGGCCGA GGCGGAGAAG
GCGTTTACCG GCGAGATCGA CCGCTACGTC TACTCGCGCT ACGGCAACCC GACGATCTCG
ATGTTCGAGG AGCGGCTGCG GTTGCTCGAA GGCGCTCCCG CATGCTTCGG CACCGCCAGC
GGCATGTCGG CGGTGTTCAC GTCCCTGGGT GCGCTGCTCG GGGCCGGGGA CCGACTCGTC
GCGGCGCGCA GTCTGTTCGG CTCCTGCTTC GTGGTGTGTA ACGAGATCCT GCCGCGCTGG
GGCGTGGAGA CGGTGTTCGT CGACGGTGAG GACCTCGCCC AGTGGGAGGA GGCACTGTCT
GTGCCCACCC AGGCGGTGTT CTTCGAGACC CCGTCGAACC CGATGCAGTC GCTGGTCGAC
ATCGCCGCGG TGTGCGACCT CGCTCATGCG GCCGGGGCAA AAGTGGTGTT GGACAACGTC
TTCGCCACTC CGATCCTGCA GCAGGGGATG CCGCTGGGCG CCGACGTCGT GGTGTATTCG
GGCACCAAGC ACATCGACGG GCAGGGCCGG GTGCTCGGCG GGGCGATCCT GGGCGACAAG
GAGTACATCG ACGGCCCGGT GCAGAAGTTG ATGCGCCACA CCGGTCCTGC GCTGAGCCCG
TTCAACGCGT GGACCCTGCT CAAGGGTCTG GAGACGATGG CTCTCCGTGT GCAGCACCAG
AATTCGTCGG CGCACCGCAT CGCCGAGTTC CTCGAAGGTC ACTCCGCGGT GAGCTGGGTG
AAGTACCCGT TCCTGGAGTC GCATCCGCAG TACGACCTGG CCAAGAGGCA GATGACGGGT
GGCGGCACGG TGGTCACGTT CGAGCTCGCG GGTGCGACGA AGGAGCGCGC CTTCGAGGTG
CTCGACAAGC TGCAGATCGT CGACATCTCC AACAACCTCG GTGACGCGAA ATCGTTGATC
ACCCACCCGG CCACCACGAC TCACCGGGCG ATGGGCCCGG AGGGACGCGC CGCGATCGGC
CTCGGTGACG GCGTCGTGCG GATATCGGTC GGACTCGAGG GCACCGAGGA CCTGATCGCC
GACCTCGACA GGGCACTCGG GTAG
|
|---|
| Protein sequence | MSPEPDSVPS VRIPTPLPDG VGQATIGVRG GLLRSGFEET AEAIYLTSGY VYESAAEAEK
AFTGEIDRYV YSRYGNPTIS MFEERLRLLE GAPACFGTAS GMSAVFTSLG ALLGAGDRLV
AARSLFGSCF VVCNEILPRW GVETVFVDGE DLAQWEEALS VPTQAVFFET PSNPMQSLVD
IAAVCDLAHA AGAKVVLDNV FATPILQQGM PLGADVVVYS GTKHIDGQGR VLGGAILGDK
EYIDGPVQKL MRHTGPALSP FNAWTLLKGL ETMALRVQHQ NSSAHRIAEF LEGHSAVSWV
KYPFLESHPQ YDLAKRQMTG GGTVVTFELA GATKERAFEV LDKLQIVDIS NNLGDAKSLI
THPATTTHRA MGPEGRAAIG LGDGVVRISV GLEGTEDLIA DLDRALG
|
|---|
| |