Gene Mflv_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0088 
Symbol 
ID4971711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp78682 
End bp79440 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID640454294 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001131372 
Protein GI145220694 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CATCAGACGC CCGCCGGGTC GCAGTGGTCA CCGGGGCCAG CGCCGGAATC 
GGTGAAGCAA TCGCCAGAAC TCTTGCGGCG CAGGGCTTTC ACGTGATCTG CGTGGCACGG
AGAGAGGGTC CGATCAAGGC GCTGGCCGCC GAGATCGACG GGACGGCGAT TGTGGCGGAC
GTCACTGACC CGACGGCGGT GGCGGCGCTC GCCGGACGGC TCGACCGGGT CGACGTCCTG
GTCAACAACG CCGGCGGCGC CCGCGGCCTG GAGTCCATCT CCGACGCCGA CGTGGAGAAC
TGGCGGTGGA TGTGGGAGGC CAACGTGATG GGCACCCTGC ACGTCACCAG GGCACTGCTG
CCGAAGCTGA TCGATTCCGG CGACGGGCTG ATCGTCACGA TCACCTCGAT CGCGGCGGTG
GAGATCTACG ACAACGGCGG CGGGTACACG TCGGCCAAGC ACGCGCAGGG GGTCCTGCAC
CGCACGCTGC GCAGCGAGCT GCTCGGAAAA CCGGTGCGGC TCACCGAGGT TGCGCCGGGC
ATGGTGAAGA CCGACTTCTC GCTGAACCGC TTCGACGGCG ACGCCGAACG CGCCGAGAAG
GTGTACGAGG GGGTGACGCC GCTGGTGGCC GAGGACATCG CCGAGGTCGT CGGCTTCGTC
GCCAGCCGAC CGTCGCACGT CGACCTCGAC CTGATCGTGG TCCGCCCACG CGACCAGGTG
TCCGGGGCCA GCGGCTCGCG GTTCCACCGG CAGAGCTGA
 
Protein sequence
MTTPSDARRV AVVTGASAGI GEAIARTLAA QGFHVICVAR REGPIKALAA EIDGTAIVAD 
VTDPTAVAAL AGRLDRVDVL VNNAGGARGL ESISDADVEN WRWMWEANVM GTLHVTRALL
PKLIDSGDGL IVTITSIAAV EIYDNGGGYT SAKHAQGVLH RTLRSELLGK PVRLTEVAPG
MVKTDFSLNR FDGDAERAEK VYEGVTPLVA EDIAEVVGFV ASRPSHVDLD LIVVRPRDQV
SGASGSRFHR QS