| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0065 |
|---|
| Symbol | |
|---|
| ID | 4971688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 57366 |
|---|
| End bp | 59075 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640454271 |
|---|
| Product | uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_001131349 |
|---|
| Protein GI | 145220671 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.255039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.829091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGC GAGGACGCAA GAACAAGCCC GGCCGCATCA CGTTCGTCGG CTCCGGACCC
GGTGATCCGG GTCTGTTGAC GTCACGTGCC CGCGCTGTGC TGGCCAACGC CGCCCTGGTG
TTCACCGATC CCGACGTGCC TGAGGCAGTG CGCGCCCTGG TGGGCTCCGA GCTGCCGCCG
CCGTCGGGGC CGTTGCCCCC GGTGGCCGAC GCGGCGCCCA AGACCGCCGC TGCCGGCGCC
GATCAGCCGG CGAGCCAGGA CGCCGCCCCG GCCGACGCCG CGAAGACCGC CAAAGCCGCC
GAGGATGCGG TGATCCCGGG TGGCCCCGAT GTGCGGCCCG CGCTCGGTGA TCCGGCCGAG
GTCGCCAAGA CGCTGGCCCA CGAGGCTCGT ACGGGTGTCG ACGTGGTCCG GCTCGTCGCC
GGGGATCCGC TGTCGAACGA CTCGGTGATC ACCGAGGTGA ACGCGCTGGC CAAGACCCAG
CTGAGCTTCG AGATCGTGCC CGGACTGCCC GGTACCTCGG CTGTGCCGAC GTATGCCGGT
CTGCCGCTGG GCTCCTCGCA CACCGTCGCC GACGTGCGCG GGGATGTCGA CTGGGCGGCG
CTGGCCGCCG CGCCGGGACC GCTGATCCTG CACGCGACCC CGTCGCACCT TCCCGAGGCG
GCGCGCACGC TGATCGAGTA CGGCCTCGCC GAGTCCACCC CCGCGGTGGT CACCGCCAAC
GGCACCACGT GCCAACAGCG TTCGGTCGAG ACCACGCTCG CCGGTCTGCT CGACAAGGCC
GCGCTGGCCG GTACCGAGCC CGCCGGGCCG CTGACGGGGA CGCTGGTCGT CACCATCGGT
CGCACCGTCG CCAACCGCGC GAAGCTGAAC TGGTGGGAGA GCCGTGCGCT GTACGGCTGG
ACCGTCCTCG TGCCGCGCAC CAAGGACCAG GCCGGTGAGA TGAGCGATCG TCTCGTAGGA
CACGGCGCGC TGCCGATCGA GGTGCCGACC ATCGCCGTCG AGCCGCCGCG CAGCCCCGCC
CAGATGGAAA GGGCCGTCAA GGGTTTGGTG GACGGCCGAT TCCAGTGGGT GGTGTTCACC
TCCACCAACG CCGTGCGTGC GGTGTGGGAG AAGTTCAACG AGTTCGGCCT CGACGCCCGC
GCGTTCTCCG GTGTGAAGAT CGCCTGCGTC GGACAGGCGA CCGCTGAGAA GGTGCGCGCG
TTCGGGATCA ACCCGGAGCT GGTGCCCACC GGCGAGCAGT CGTCCCTCGG CCTGCTCGAC
GAATTCCCGC CGTACGACGA CATCTTCGAT CCGGTCAACC GGGTGCTGTT GCCGCGTGCC
GACATCGCCA CCGAGACGCT GGCCGAAGGT CTGCGCGAAC TCGGTTGGGA GATCGAGGAT
GTCACCGCGT ACCGCACCGT CCGCGCGGCT CCGCCGCCGG CGCACACCCG CGAGATGATC
AAGACGGGCG GCTTCGACGC CGTGTGCTTC ACGTCGAGCT CGACGGTGCG CAACCTGGTC
GGCATCGCCG GCAAGCCGCA CGCCCGCACG ATCGTCGCGT GCATCGGACC CAAGACTGCC
GAAACCGCAG CGGAATTCGG GCTGCGCGTC GACGTCCAGC CCGAGGTGGC CGCGGTCGGA
CCGCTGGTCG AGGCGCTGGC CGAACACGCT GCCCGGCTGC GCGCCGAGGG TGCGTTGCCG
CCGCCGCGGA AGAAGAGTCG CCGCCGCTAG
|
|---|
| Protein sequence | MSLRGRKNKP GRITFVGSGP GDPGLLTSRA RAVLANAALV FTDPDVPEAV RALVGSELPP
PSGPLPPVAD AAPKTAAAGA DQPASQDAAP ADAAKTAKAA EDAVIPGGPD VRPALGDPAE
VAKTLAHEAR TGVDVVRLVA GDPLSNDSVI TEVNALAKTQ LSFEIVPGLP GTSAVPTYAG
LPLGSSHTVA DVRGDVDWAA LAAAPGPLIL HATPSHLPEA ARTLIEYGLA ESTPAVVTAN
GTTCQQRSVE TTLAGLLDKA ALAGTEPAGP LTGTLVVTIG RTVANRAKLN WWESRALYGW
TVLVPRTKDQ AGEMSDRLVG HGALPIEVPT IAVEPPRSPA QMERAVKGLV DGRFQWVVFT
STNAVRAVWE KFNEFGLDAR AFSGVKIACV GQATAEKVRA FGINPELVPT GEQSSLGLLD
EFPPYDDIFD PVNRVLLPRA DIATETLAEG LRELGWEIED VTAYRTVRAA PPPAHTREMI
KTGGFDAVCF TSSSTVRNLV GIAGKPHART IVACIGPKTA ETAAEFGLRV DVQPEVAAVG
PLVEALAEHA ARLRAEGALP PPRKKSRRR
|
|---|
| |